RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 IRGQQ8WZA9 623 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 ARMCX1Q9P291 453 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 ANGPT4Q9Y264 503 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 TSPAN1O60635 241 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 LIPMQ5VYY2 423 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 BBS4Q96RK4 519 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 SLA2Q9H6Q3 261 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 DYRK3O43781 588 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 UGT2B4P06133 528 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 MAPK9P45984 424 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 MPP2Q14168 576 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 PKN1Q16512 942 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 CFAP206Q8IYR0 622 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 SLC7A14Q8TBB6 771 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 REEP2Q9BRK0 252 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 C5orf60A6NFR6 353 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 CYP11B1P15538 503 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 GLDCP23378 1020 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 IFI35P80217 286 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-203ENST00000353578 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-203ENST00000353578 AFTPHQ6ULP2 937 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 MSANTD1Q6ZTZ1 278 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
COL6A3-203ENST00000353578 SLC9A8Q9Y2E8 581 aa12.74□□□□□ -0.37
COL6A3-203ENST00000353578 PRAMEF1O95521 474 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 RPL21P46778 160 aaKnown RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ACTR3P61158 418 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SSTP61278 116 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ASB15Q8WXK1 588 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 CDH7Q9ULB5 785 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 CSADQ9Y600 493 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 APOC4-APOC2K7ER74 178 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 APOC2P02655 101 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 RTP1P59025 263 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 HDDC3Q8N4P3 179 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PIH1D2Q8WWB5 315 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 QRFPRQ96P65 431 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SCGB3A2Q96PL1 93 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 METP08581 1390 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 KIF28PB7ZC32 967 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GSTT2P0CG29 244 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 HTR2AP28223 471 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 RBL1P28749 1068 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GRIA1P42261 906 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SCNN1BP51168 640 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 BTBD8Q5XKL5 378 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GET4Q7L5D6 327 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 NT5DC3Q86UY8 548 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ERLEC1Q96DZ1 483 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 LACRTQ9GZZ8 138 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GNEQ9Y223 722 aaKnown RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 AP5Z1O43299 807 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ADRA1DP25100 572 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 VPS26BQ4G0F5 336 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 LRRC69Q6ZNQ3 347 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SLC30A8Q8IWU4 369 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ELMOD1Q8N336 334 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ETNPPLQ8TBG4 499 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GGA3Q9NZ52 723 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SULT1C3Q6IMI6 304 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 KLF6Q99612 283 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SEMA6AQ9H2E6 1030 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PDE10AQ9Y233 779 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PCDHGA11Q9Y5H2 935 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PRAMEF33A0A0G2JMD5 474 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PRAMEF10O60809 474 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PCSK1P29120 753 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 HNRNPH3P31942 346 aaKnown RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 AP2S1P53680 142 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PPP3R2Q96LZ3 170 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 MIPEPQ99797 713 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PLEKHA6Q9Y2H5 1048 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PLD2O14939 933 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 CRYZL1O95825 349 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 CLUP10909 449 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 EPHA7Q15375 998 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 NUDT18Q6ZVK8 323 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 SATL1Q86VE3 508 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GALNT12Q8IXK2 581 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 ENDOVQ8N8Q3 282 aaKnown RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 THRSPQ92748 146 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 THAP2Q9H0W7 228 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GATBO75879 557 aaKnown RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 RPA3P35244 121 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 FOXP4Q8IVH2 680 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-203ENST00000353578 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 GDAP2Q9NXN4 497 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 USP18Q9UMW8 372 aa12.73□□□□□ -0.37
COL6A3-203ENST00000353578 PLEKHA8P1O95397 391 aa12.72□□□□□ -0.37
COL6A3-203ENST00000353578 VNN2O95498 520 aa12.72□□□□□ -0.37
COL6A3-203ENST00000353578 MAPTP10636 758 aaKnown RBP12.72□□□□□ -0.37
COL6A3-203ENST00000353578 CBX5P45973 191 aa12.72□□□□□ -0.37
COL6A3-203ENST00000353578 KCNJ1P48048 391 aa12.72□□□□□ -0.37
COL6A3-203ENST00000353578 UGT2B15P54855 530 aa12.72□□□□□ -0.37
COL6A3-203ENST00000353578 PRKCEQ02156 737 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms