RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 C11orf74Q86VG3 221 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 RYBPQ8N488 228 aaPredicted RBP12.05□□□□□ -0.48
SNCA-202ENST00000345009 PLD5Q8N7P1 536 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 ZNF366Q8N895 744 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 CCNYQ8ND76 341 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 FRS2Q8WU20 508 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 MYO19Q96H55 970 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 SPACA7Q96KW9 195 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 OSBPL8Q9BZF1 889 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 SEPT3Q9UH03 358 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 NCKAP1Q9Y2A7 1128 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 JRKLQ9Y4A0 524 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 hCG_1818297A0A087WSY0 165 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 ANTXRLA6NF34 631 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 C1QTNF3-AMACRE9PGA6 284 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 J3KR12 359 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 K7ERQ8 282 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 SIN3BO75182 1162 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 TMCC1O94876 653 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 POP4O95707 220 aaKnown RBP12.04□□□□□ -0.48
SNCA-202ENST00000345009 IGSF6O95976 241 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 ADH1BP00325 375 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 PYGMP11217 842 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 KRT10P13645 584 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 CCNCP24863 283 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 OXTRP30559 389 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 MARCKSL1P49006 195 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 RHOAP61586 193 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 DYNLT1P63172 113 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 KCNC4Q03721 635 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 ZNF235Q14590 738 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 GRM3Q14832 879 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 ZNF569Q5MCW4 686 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 MARC1Q5VT66 337 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 TSSK4Q6SA08 328 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 KIAA1324Q6UXG2 1013 aaKnown RBP12.04□□□□□ -0.48
SNCA-202ENST00000345009 Q6ZVU0 165 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 BBS12Q6ZW61 710 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 WDR5BQ86VZ2 330 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 RASSF3Q86WH2 238 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 REXO1L1PQ8IX06 675 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 MAML2Q8IZL2 1156 aaPredicted RBP12.04□□□□□ -0.48
SNCA-202ENST00000345009 MDGA1Q8NFP4 955 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 GANCQ8TET4 914 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 ALG3Q92685 438 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 PTPRN2Q92932 1015 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 FATE1Q969F0 183 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 HAUS1Q96CS2 278 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 LRIG1Q96JA1 1093 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 MRGPRX1Q96LB2 322 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 GDAP1L1Q96MZ0 367 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 TSGA13Q96PP4 275 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 CINPQ9BW66 212 aaPredicted RBP12.04□□□□□ -0.48
SNCA-202ENST00000345009 HEMGNQ9BXL5 484 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 RSPH9Q9H1X1 276 aaPredicted RBP12.04□□□□□ -0.48
SNCA-202ENST00000345009 DYRK4Q9NR20 520 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 C2orf42Q9NWW7 574 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 DTLQ9NZJ0 730 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 PACSIN2Q9UNF0 486 aaPredicted RBP12.04□□□□□ -0.48
SNCA-202ENST00000345009 WDFY4Q6ZS81 3184 aa12.04□□□□□ -0.48
SNCA-202ENST00000345009 H0Y858 1186 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 APOC4-APOC2K7ER74 178 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 KCNK3O14649 394 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 DDX3YO15523 660 aaKnown RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 MTSS1O43312 755 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 SMAD6O43541 496 aaKnown RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 MFSD11O43934 449 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 MAFKO60675 156 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 GSRP00390 522 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 IL1BP01584 269 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 APOC2P02655 101 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 GABRG2P18507 467 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 NDUFV2P19404 249 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 CES1P23141 567 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 CHRNA3P32297 505 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 MAPK8P45983 427 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 FNTBP49356 437 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 GBE1Q04446 702 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNCA-202ENST00000345009 HNRNPDQ14103 355 aaKnown RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 HS1BP3Q53T59 392 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 LEKR1Q6ZMV7 388 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 KBTBD6Q86V97 674 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 STK40Q8N2I9 435 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 TMIEQ8NEW7 156 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 OR2AP1Q8NGE2 309 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 OR2A12Q8NGT7 310 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 ATOH1Q92858 354 aaPredicted RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 HDAC11Q96DB2 347 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 PPP1R16AQ96I34 528 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 PSKH2Q96QS6 385 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 OMDQ99983 421 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 HEPHQ9BQS7 1158 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 OSBPL1AQ9BXW6 950 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 MKRN2Q9H000 416 aaKnown RBP12.03□□□□□ -0.48
SNCA-202ENST00000345009 CARD9Q9H257 536 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 TNKS2Q9H2K2 1166 aa12.03□□□□□ -0.48
SNCA-202ENST00000345009 SEMA4AQ9H3S1 761 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms