RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CEP170P1Q96L14 293 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 RPL10LQ96L21 214 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 SEC22CQ9BRL7 303 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 KIFC1Q9BW19 673 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 CDADC1Q9BWV3 514 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 PRDM8Q9NQV8 689 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 TMEM39AQ9NV64 488 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 BTG4Q9NY30 223 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 APEX2Q9UBZ4 518 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 SNX7Q9UNH6 387 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 COL5A2P05997 1499 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 KRT87PA6NCN2 255 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 FADS2P1A8MWK0 482 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 PLK4O00444 970 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 ACOT8O14734 319 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 NUPL2O15504 423 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 RNGTTO60942 597 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 BCAS2O75934 225 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 TRIM16O95361 564 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 PAHP00439 452 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 IL1BP01584 269 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 PLA2G4BP0C869 781 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 ATF6P18850 670 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 POU3F3P20264 500 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 DDCP20711 480 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 CCNCP24863 283 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 ELK3P41970 407 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 TMBIM6P55061 237 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 HADHBP55084 474 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 ZIK1Q3SY52 487 aaPredicted RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 FAM209BQ5JX69 171 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 NXNQ6DKJ4 435 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC16A12Q6ZSM3 486 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 ADCK1Q86TW2 530 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 LURAP1LQ8IV03 231 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 RAB2BQ8WUD1 216 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 APBA2Q99767 749 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 RTKNQ9BST9 563 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 KCNN2Q9H2S1 579 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 LTB4R2Q9NPC1 389 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 IL17RBQ9NRM6 502 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC17A6Q9P2U8 582 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 AURKCQ9UQB9 309 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 IPPQ9Y573 584 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 RNF103-CHMP3A0A140T963 221 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 CIB4A0PJX0 185 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 EVPLLA8MZ36 301 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 NOS1APO75052 506 aaPredicted RBP9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 GCNT3O95395 438 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 MT-ND1P03886 318 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 GSNP06396 782 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 IL7RP16871 459 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 ITGALP20701 1170 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 ACAT1P24752 427 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 MERTKQ12866 999 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 SEMA3AQ14563 771 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 KNOP1Q1ED39 458 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 BRMS1LQ5PSV4 323 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 XAF1Q6GPH4 301 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 MAMDC4Q6UXC1 1216 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 BBS12Q6ZW61 710 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 TMPRSS9Q7Z410 1059 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 SYTL1Q8IYJ3 562 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 GALNT11Q8NCW6 608 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 LPGAT1Q92604 370 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 MTMR9Q96QG7 549 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 CPNE5Q9HCH3 593 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 MRPL40Q9NQ50 206 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 ZC4H2Q9NQZ6 224 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 MRPL39Q9NYK5 338 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 TMEM9Q9P0T7 183 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 ENOPH1Q9UHY7 261 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.84
PTCHD4-201ENST00000339488 PNMA6FA0A0J9YX94 578 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 SLC22A1O15245 554 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 PSTPIP1O43586 416 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 LIASO43766 372 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 NDUFS6O75380 124 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 SLITRK3O94933 977 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 PGK2P07205 417 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 CYP2C8P10632 490 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 ARSAP15289 507 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 CYP7A1P22680 504 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 MYF6P23409 242 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TBXAS1P24557 533 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 CCDC142Q17RM4 750 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TMEM119Q4V9L6 283 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 PAGE2Q7Z2X7 111 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 LINC00518Q8N0U6 118 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 LARGE2Q8N3Y3 721 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 SIMC1Q8NDZ2 872 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 MSANTD3Q96H12 275 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 C8orf37Q96NL8 207 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 SNX18Q96RF0 628 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 RSPH9Q9H1X1 276 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 GMEB2Q9UKD1 530 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 C5P01031 1676 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms