RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SLC25A45Q8N413 288 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 RYBPQ8N488 228 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 BMFQ96LC9 184 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 HEPHQ9BQS7 1158 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 SELENOOQ9BVL4 669 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 UCKL1Q9NWZ5 548 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 HECAQ9UBI9 543 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
NUDCD3-201ENST00000338427 SIGLEC16A6NMB1 481 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 TRIM38O00635 465 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 RAD51BO15315 384 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 CCP110O43303 1012 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 PRNPP04156 253 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 THEGLP0DJG4 465 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 RHOQP17081 205 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 PTPN9P43378 593 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 RECQLP46063 649 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 NSFP46459 744 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 TYRO3Q06418 890 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 SLC20A2Q08357 652 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 STX1AQ16623 288 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 SETMARQ53H47 684 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 SLC45A4Q5BKX6 768 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 ATXN7L2Q5T6C5 722 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 STRADAQ7RTN6 431 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 PROSER1Q86XN7 944 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 OR13H1Q8NG92 308 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 BAP1Q92560 729 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 ERGIC2Q96RQ1 377 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 CCDC86Q9H6F5 360 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 ZDHHC6Q9H6R6 413 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 ERVMER34-1Q9H9K5 563 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 PREBQ9HCU5 417 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 DYRK4Q9NR20 520 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 GPATCH2LQ9NWQ4 482 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 GGT7Q9UJ14 662 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 DMTF1Q9Y222 760 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 FREM2Q5SZK8 3169 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 LAMA5O15230 3695 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 KNTC1P50748 2209 aa13.62□□□□□ -0.23
NUDCD3-201ENST00000338427 POM121BA6NF01 834 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 L1CAMP32004 1257 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 ABL2P42684 1182 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 CLCN6P51797 869 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 NRG1Q02297 640 aaPredicted RBP13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 SMAD1Q15797 465 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 ARL13BQ3SXY8 428 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 ANO6Q4KMQ2 910 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 LRRC73Q5JTD7 316 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 ACAD10Q6JQN1 1059 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 ZNF783Q6ZMS7 281 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 TRIM72Q6ZMU5 477 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 GCNT7Q6ZNI0 430 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 MON1BQ7L1V2 547 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 PARS2Q7L3T8 475 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 SLFN11Q7Z7L1 901 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 MCOLN2Q8IZK6 566 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 TMEM145Q8NBT3 493 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 HNRNPLLQ8WVV9 542 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 TSC1Q92574 1164 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 TBC1D31Q96DN5 1066 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 CCDC114Q96M63 670 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 NAP1L5Q96NT1 182 aaPredicted RBP13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 CALN1Q9BXU9 219 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 HDAC8Q9BY41 377 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 SLC17A9Q9BYT1 436 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 TMEM248Q9NWD8 314 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 ITM2BQ9Y287 266 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 RAXQ9Y2V3 346 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 FADS3Q9Y5Q0 445 aa13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 DSPP15924 2871 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-201ENST00000338427 IGLON5A6NGN9 336 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 C16orf96A6NNT2 1141 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 INSIG1O15503 277 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 BUB1O43683 1085 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 SIGLEC6O43699 453 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 KDELR3O43731 214 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 CREB3O43889 395 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 ADRB3P13945 408 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 ARRB1P49407 418 aaPredicted RBP13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 PPP1R15BQ5SWA1 713 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 CCDC183Q5T5S1 534 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 FBXL19Q6PCT2 694 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 Q6ZSR6 202 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 IQCHQ86VS3 1027 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 SLC22A18ASQ8N1D0 253 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 PCDH20Q8N6Y1 951 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 C3orf20Q8ND61 904 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 KLHL32Q96NJ5 620 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 MCEEQ96PE7 176 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 TRPM6Q9BX84 2022 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms