RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 RSPH9Q9H1X1 276 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 RBM22Q9NW64 420 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 SAE1Q9UBE0 346 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 SCML1Q9UN30 329 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ACTL7AQ9Y615 435 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 C1QTNF3-AMACRE9PGA6 284 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF217O75362 1048 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 IL1BP01584 269 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 DNTTP04053 509 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 PRNPP04156 253 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 SP9P0CG40 484 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 CCNB1P14635 433 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 VAV1P15498 845 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 PECAM1P16284 738 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 GABRG2P18507 467 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 CES1P23141 567 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 SLC8A1P32418 973 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 MMP13P45452 471 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 CSNK1DP48730 415 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 EIF3EP60228 445 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 RPS14P62263 151 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 ITKQ08881 620 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 SLC10A7Q0GE19 358 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 CCDC15Q0P6D6 951 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 GRM3Q14832 879 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 LONRF2Q1L5Z9 754 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 USP39Q53GS9 565 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 DCAF12L1Q5VU92 463 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 HEATR6Q6AI08 1181 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 DARS2Q6PI48 645 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 TSSK4Q6SA08 328 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 KIAA1324Q6UXG2 1013 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 DPY19L3Q6ZPD9 716 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 ZC3H18Q86VM9 953 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 LONP2Q86WA8 852 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 RASSF3Q86WH2 238 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 MAML2Q8IZL2 1156 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 TEX26Q8N6G2 289 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 TMIEQ8NEW7 156 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 ACTL9Q8TC94 416 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 GANCQ8TET4 914 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 MAML1Q92585 1016 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 LRIG1Q96JA1 1093 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 MRGPRX1Q96LB2 322 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 OLFM3Q96PB7 478 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 PSKH2Q96QS6 385 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 NAP1L3Q99457 506 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 FRMD8P1Q9BZ68 369 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 TM6SF2Q9BZW4 377 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 KCNH6Q9H252 994 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 CD248Q9HCU0 757 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 NCKAP1Q9Y2A7 1128 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 ZKSCAN5Q9Y2L8 839 aa12.1□□□□□ -0.47
SPTLC1-202ENST00000337841 KRIT1O00522 736 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF821O75541 412 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 PEX11BO96011 259 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 ADH1BP00325 375 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 JCHAINP01591 159 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 ATP1A1P05023 1023 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 PRLRP16471 622 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 NDUFV2P19404 249 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 C5AR1P21730 350 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 OXTRP30559 389 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 CASQ1P31415 396 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 CXCR5P32302 372 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 MAPK8P45983 427 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 PXNP49023 591 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 FNTBP49356 437 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 CCNHP51946 323 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 COPAP53621 1224 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 OTUD4Q01804 1114 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 NOMO1Q15155 1222 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 TTC31Q49AM3 519 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 SLC45A4Q5BKX6 768 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 SRLQ86TD4 932 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 WDR5BQ86VZ2 330 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 CDKL3Q8IVW4 592 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 C17orf53Q8N3J3 647 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 TSEN2Q8NCE0 465 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 NAPGQ99747 312 aaPredicted RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 HERPUD2Q9BSE4 406 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 ITM2CQ9NQX7 267 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 DYRK4Q9NR20 520 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 HOMER3Q9NSC5 361 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 ZSCAN32Q9NX65 697 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 SEPT10Q9P0V9 454 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 LHX3Q9UBR4 397 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 PPM1HQ9ULR3 514 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 SNX12Q9UMY4 172 aa12.09□□□□□ -0.47
SPTLC1-202ENST00000337841 KCNK1O00180 336 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 CES2O00748 559 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 STK10O94804 968 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 FGGP02679 453 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms