RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 C6orf62Q9GZU0 229 aaPredicted RBP13.91□□□□□ -0.18
RTN4-202ENST00000337526 AAASQ9NRG9 546 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 DUSP12Q9UNI6 340 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 LRCH4O75427 683 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 CCNE2O96020 404 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 HNRNPLP14866 589 aaKnown RBP eCLIP13.91□□□□□ -0.185e-9■■■□□ 16.4
RTN4-202ENST00000337526 HK2P52789 917 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 CEP78Q5JTW2 689 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 TYW3Q6IPR3 259 aaKnown RBP13.91□□□□□ -0.18
RTN4-202ENST00000337526 TMEM132CQ8N3T6 1108 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 ZNF276Q8N554 614 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 SEPT8Q92599 483 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 C6orf203Q9P0P8 240 aaPredicted RBP13.91□□□□□ -0.18
RTN4-202ENST00000337526 MTF2Q9Y483 593 aaPredicted RBP13.91□□□□□ -0.18
RTN4-202ENST00000337526 RECQL5O94762 991 aaPredicted RBP13.91□□□□□ -0.18
RTN4-202ENST00000337526 WEE1P30291 646 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 SCNN1GP51170 649 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 RPS7P62081 194 aaKnown RBP13.91□□□□□ -0.18
RTN4-202ENST00000337526 ROR2Q01974 943 aaKnown RBP13.91□□□□□ -0.18
RTN4-202ENST00000337526 TTC23Q5W5X9 447 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 LUZP2Q86TE4 346 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 MED8Q96G25 268 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 SLC4A5Q9BY07 1137 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 STMN3Q9NZ72 180 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 CLUHO75153 1309 aa13.91□□□□□ -0.18
RTN4-202ENST00000337526 CASZ1Q86V15 1759 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 A8MUI8 341 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 FAM220BPB1ANY3 271 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 HGFP14210 728 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 DGCR6Q14129 220 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 FASTKD3Q14CZ7 662 aaKnown RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 TSHZ1Q6ZSZ6 1077 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 AMIGO2Q86SJ2 522 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 ADHFE1Q8IWW8 467 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 KRT78Q8N1N4 520 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 NKAPQ8N5F7 415 aaKnown RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 CPT1BQ92523 772 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 TLCD1Q96CP7 247 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 KLQ9UEF7 1012 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 PAPSS1O43252 624 aaPredicted RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 C2P06681 752 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 ST13P50502 369 aaKnown RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 VGLL4Q14135 290 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 C8orf59Q8N0T1 100 aaPredicted RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 SPATA6LQ8N4H0 392 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 ZNF614Q8N883 585 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 FNIP1Q8TF40 1166 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 PANX3Q96QZ0 392 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 KLHL3Q9UH77 587 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 PRPF19Q9UMS4 504 aaKnown RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 COPG1Q9Y678 874 aaKnown RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 NRCAMQ92823 1304 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 AHCYL1O43865 530 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 WFS1O76024 890 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 GRK3P35626 688 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 ACSM2AQ08AH3 577 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 STXBP5Q5T5C0 1151 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 ACSM2BQ68CK6 577 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 STK40Q8N2I9 435 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 C18orf25Q96B23 403 aaPredicted RBP13.9□□□□□ -0.18
RTN4-202ENST00000337526 ARL15Q9NXU5 204 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 SNX8Q9Y5X2 465 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 TCHHQ07283 1943 aa13.9□□□□□ -0.18
RTN4-202ENST00000337526 ADM5C9JUS6 153 aa13.9□□□□□ -0.19
RTN4-202ENST00000337526 PPP2R1BP30154 601 aa13.9□□□□□ -0.19
RTN4-202ENST00000337526 ALDH9A1P49189 494 aa13.9□□□□□ -0.19
RTN4-202ENST00000337526 EPS8Q12929 822 aa13.9□□□□□ -0.19
RTN4-202ENST00000337526 ADAM2Q99965 735 aa13.9□□□□□ -0.19
RTN4-202ENST00000337526 B3GNT5Q9BYG0 378 aa13.9□□□□□ -0.19
RTN4-202ENST00000337526 ADPRHL2Q9NX46 363 aa13.9□□□□□ -0.19
RTN4-202ENST00000337526 ERBB2P04626 1255 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 FGFR1P11362 822 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 CDKN2BP42772 138 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 PIK3CGP48736 1102 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 FOLH1Q04609 750 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 BCL2L1Q07817 233 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 ZIK1Q3SY52 487 aaPredicted RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 ARMC12Q5T9G4 340 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 RBM15BQ8NDT2 890 aaKnown RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 OR52K2Q8NGK3 314 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 RDH11Q8TC12 318 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 FAM45AQ8TCE6 357 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 PRRG3Q9BZD7 231 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 C12orf65Q9H3J6 166 aaKnown RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 DOLKQ9UPQ8 538 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 COMMD3-BMI1R4GMX3 469 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 SERPINI2O75830 405 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 AKR1A1P14550 325 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 MSX2P35548 267 aaPredicted RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 DGUOKQ16854 277 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 MON1BQ7L1V2 547 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 LRRC52Q8N7C0 313 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 FAM126AQ9BYI3 521 aaPredicted RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 HMG20AQ9NP66 347 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 STARD7Q9NQZ5 370 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms