RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CASQ2O14958 399 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 AURKAO14965 403 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 ANGPT2O15123 496 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 SNX2O60749 519 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 RHOBTB1O94844 696 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 SIX3O95343 332 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 ITGBL1O95965 494 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 PPM1FP49593 454 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 IDH3AP50213 366 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 DRICH1Q6PGQ1 229 aaPredicted RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 CNSTQ6PJW8 725 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 PAOXQ6QHF9 649 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 MTFMTQ96DP5 389 aaKnown RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 CNDP1Q96KN2 507 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 SPATA17Q96L03 361 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 TUBGCP5Q96RT8 1024 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 TM6SF2Q9BZW4 377 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 KLHL4Q9C0H6 718 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 ADNPQ9H2P0 1102 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 WDR41Q9HAD4 459 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 FBRSL1Q9HCM7 1045 aaKnown RBP8.34□□□□□ -1.07
HPS4-201ENST00000336873 MID1IP1Q9NPA3 183 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 KCTD3Q9Y597 815 aa8.34□□□□□ -1.07
HPS4-201ENST00000336873 ZNF839A8K0R7 811 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 SH3BP5O60239 455 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 DDHD2O94830 711 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 SNAI1O95863 264 aaPredicted RBP8.34□□□□□ -1.08
HPS4-201ENST00000336873 FMO4P31512 558 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 NR2C2P49116 596 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 GPR15P49685 360 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 TAS2R39P59534 338 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 LSM12Q3MHD2 195 aaKnown RBP8.34□□□□□ -1.08
HPS4-201ENST00000336873 ZIK1Q3SY52 487 aaPredicted RBP8.34□□□□□ -1.08
HPS4-201ENST00000336873 GPR158Q5T848 1215 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 MARC1Q5VT66 337 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 FAM171A1Q5VUB5 890 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 FRA10AC1Q70Z53 315 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 SLC26A9Q7LBE3 791 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 TDRPQ86YL5 185 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.34□□□□□ -1.08
HPS4-201ENST00000336873 MYO1HQ8N1T3 1032 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 PPTC7Q8NI37 304 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 TRPC4APQ8TEL6 797 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 FBXO32Q969P5 355 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 MAML3Q96JK9 1138 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 PARK7Q99497 189 aaKnown RBP8.34□□□□□ -1.08
HPS4-201ENST00000336873 CIB1Q99828 191 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 BCO2Q9BYV7 579 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 MUC3BQ9H195 1237 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 EFCAB1Q9HAE3 211 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 FAM105AQ9NUU6 356 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.08
HPS4-201ENST00000336873 ZMYM5Q9UJ78 669 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 LZTS1Q9Y250 596 aa8.34□□□□□ -1.08
HPS4-201ENST00000336873 SMAPO00193 183 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TIMM44O43615 452 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PAGE1O75459 146 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 NDUFS3O75489 264 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 SERPINA6P08185 405 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 GRK2P25098 689 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 NFKBIAP25963 317 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 HOXA11P31270 313 aaPredicted RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 GRIA3P42263 894 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 RPL14P50914 215 aaKnown RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 DLG1Q12959 904 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 KLF10Q13118 480 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 DDX39BQ13838 428 aaKnown RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 DUSP28Q4G0W2 176 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TIGD5Q53EQ6 642 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PPP1R15BQ5SWA1 713 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 DEFB128Q7Z7B8 93 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TAC4Q86UU9 113 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CCT7Q99832 543 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 KANSL3Q9P2N6 904 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CDH22Q9UJ99 828 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 ZNF711Q9Y462 761 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 BCLAF3A2AJT9 711 aaKnown RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 UBDO15205 165 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 INPP4BO15327 924 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TCEA3O75764 348 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 OR6B1O95007 311 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CLPTM1O96005 669 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PFKMP08237 780 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 THRAP10827 490 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 ACADSP16219 412 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 RPL17P18621 184 aaKnown RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 NR4A1P22736 598 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 GSTT1P30711 240 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 CRHR1P34998 444 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 PNPLA4P41247 253 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 DSC2Q02487 901 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 TEX44Q53QW1 395 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 GLB1LQ6UWU2 654 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 KYAT3Q6YP21 454 aaKnown RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 PIM3Q86V86 326 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 NPWQ8N729 165 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 GABPB2Q8TAK5 448 aaPredicted RBP8.33□□□□□ -1.08
HPS4-201ENST00000336873 MAPK15Q8TD08 544 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 RSPH1Q8WYR4 309 aa8.33□□□□□ -1.08
HPS4-201ENST00000336873 VPS50Q96JG6 964 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms