RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TRIM43Q96BQ3 446 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GLT8D2Q9H1C3 349 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 COPS7BQ9H9Q2 264 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SOHLH2Q9NX45 425 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RALYQ9UKM9 306 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 DOCK7Q96N67 2140 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 KANTRA0A1W2PQU2 76 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 TM9SF1O15321 606 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF208O43345 1280 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SNCGO76070 127 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPP5CP53041 499 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 NLRP12P59046 1061 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAT1AQ00266 395 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPP1R26Q5T8A7 1209 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SYDE2Q5VT97 1194 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALKBH2Q6NS38 261 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 OTOAQ7RTW8 1153 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 METTL23Q86XA0 190 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 HS6ST3Q8IZP7 471 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SIMC1Q8NDZ2 872 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR2AP1Q8NGE2 309 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR2M4Q96R27 311 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 LRRC19Q9H756 370 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 UBTD1Q9HAC8 227 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 NARFQ9UHQ1 456 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 H7C0C1 242 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RP2O75695 350 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 FHP07954 510 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 AK2P54819 239 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 COL28A1Q2UY09 1125 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 FCRLBQ6BAA4 426 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 TPH2Q8IWU9 490 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RCBTB1Q8NDN9 531 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM80Q96HE8 168 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 OCSTAMPQ9BR26 566 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MED10Q9BTT4 135 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 BCL2L14Q9BZR8 327 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF350Q9GZX5 532 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RMND5AQ9H871 391 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PNPLA3Q9NST1 481 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CFBP00751 764 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDKN2CP42773 168 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCNJ2P63252 427 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC13A2Q13183 592 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GPR176Q14439 515 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CIAPIN1Q6FI81 312 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC30A6Q6NXT4 461 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GSPT2Q8IYD1 628 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MYCT1Q8N699 235 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MCPH1Q8NEM0 835 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFT80Q9P2H3 777 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SBNO2Q9Y2G9 1366 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 POLRMTO00411 1230 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 TLR2O60603 784 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SCGNO76038 276 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 FARS2O95363 451 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 DPP6P42658 865 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 BCAR1P56945 870 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 FLI1Q01543 452 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 C3orf38Q5JPI3 329 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 BEND3Q5T5X7 828 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 METTL25Q8N6Q8 603 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM71DQ8N9W8 422 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 C11orf65Q8NCR3 313 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 IPCEF1Q8WWN9 437 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PELOQ9BRX2 385 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 TUBG2Q9NRH3 451 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 LEF1Q9UJU2 399 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ERVK-11Q9UQG0 969 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 INVSQ9Y283 1065 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF197O14709 1029 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SPTLC2O15270 562 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZSCAN5DPP0CG00 497 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 HDCP19113 662 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALDH1B1P30837 517 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 S100A10P60903 97 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 IL13RA1P78552 427 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 FGL1Q08830 312 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MERTKQ12866 999 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 KLHL22Q53GT1 634 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 DGKHQ86XP1 1220 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 SULF1Q8IWU6 871 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ASPNQ9BXN1 380 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MTFR1LQ9H019 292 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAN1C1Q9NR34 630 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 VPS51Q9UID3 782 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCNL1Q9UK58 526 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 OGDHLQ9ULD0 1010 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF35P13682 527 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GJB2P29033 226 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ELK3P41970 407 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 POU4F2Q12837 409 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GNA13Q14344 377 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZSWIM7Q19AV6 140 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 POU5F2Q8N7G0 328 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 STARD8Q92502 1023 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPP1R10Q96QC0 940 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCDC3Q9BQI4 270 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MROH8Q9H579 483 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZFYVE9O95405 1425 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms