RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 PHTF1Q9UMS5 762 aa17.21■□□□□ 0.35
DDX41-201ENST00000330503 CHD5Q8TDI0 1954 aa17.21■□□□□ 0.34
DDX41-201ENST00000330503 CCDC78A2IDD5 438 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 ZBBXA8MT70 800 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 EDF1O60869 148 aaKnown RBP17.2■□□□□ 0.34
DDX41-201ENST00000330503 LBRQ14739 615 aaKnown RBP17.2■□□□□ 0.34
DDX41-201ENST00000330503 PCSK7Q16549 785 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 STRA8Q7Z7C7 330 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 KCNMB4Q86W47 210 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 FIBCD1Q8N539 461 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 OR7D4Q8NG98 312 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 ATP2A3Q93084 1043 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 MAGEH1Q9H213 219 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 CCT8L1PA6NM43 557 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 TPP1O14773 563 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 MUSKO15146 869 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 TGM5O43548 720 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 TOP3BO95985 862 aaKnown RBP17.2■□□□□ 0.34
DDX41-201ENST00000330503 FGBP02675 491 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 HOXD9P28356 352 aaPredicted RBP17.2■□□□□ 0.34
DDX41-201ENST00000330503 SERPINB4P48594 390 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 GNA12Q03113 381 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 MSLNQ13421 630 aaPredicted RBP17.2■□□□□ 0.34
DDX41-201ENST00000330503 ADGRF1Q5T601 910 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 POTEHQ6S545 545 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 ANKS4BQ8N8V4 417 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 NSMCE1Q8WV22 266 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 GRAMD1AQ96CP6 724 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 RBBP8Q99708 897 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 TMEM106CQ9BVX2 250 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 FSD1LQ9BXM9 530 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 MANSC1Q9H8J5 431 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 IARS2Q9NSE4 1012 aaKnown RBP17.2■□□□□ 0.34
DDX41-201ENST00000330503 UXTQ9UBK9 157 aaPredicted RBP17.2■□□□□ 0.34
DDX41-201ENST00000330503 STARD13Q9Y3M8 1113 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 TCAF1Q9Y4C2 921 aa17.2■□□□□ 0.34
DDX41-201ENST00000330503 MYLKQ15746 1914 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 GOLGA8TH3BQL2 631 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 TSPAN3O60637 253 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 GJB3O75712 270 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 PDE1CQ14123 709 aaPredicted RBP17.19■□□□□ 0.34
DDX41-201ENST00000330503 RABGAP1LQ5R372 815 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 RNF187Q5TA31 235 aaPredicted RBP17.19■□□□□ 0.34
DDX41-201ENST00000330503 ESRP1Q6NXG1 681 aaKnown RBP17.19■□□□□ 0.34
DDX41-201ENST00000330503 LILRA6Q6PI73 481 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 SLC25A41Q8N5S1 370 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 KLHL23Q8NBE8 558 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 ACMSDQ8TDX5 336 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 ADAMTS19Q8TE59 1207 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 CCT6BQ92526 530 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 CLP1Q92989 425 aaKnown RBP17.19■□□□□ 0.34
DDX41-201ENST00000330503 MRM3Q9HC36 420 aaKnown RBP17.19■□□□□ 0.34
DDX41-201ENST00000330503 VPS45Q9NRW7 570 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 SMPD4Q9NXE4 827 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 CXXC1Q9P0U4 656 aaPredicted RBP17.19■□□□□ 0.34
DDX41-201ENST00000330503 SLC2A6Q9UGQ3 507 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 ACTL7AQ9Y615 435 aa17.19■□□□□ 0.34
DDX41-201ENST00000330503 GREM1O60565 184 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 CLDN11O75508 207 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 ARCN1P48444 511 aaKnown RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 ZXDBP98169 803 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 TMCO4Q5TGY1 634 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 OTUD6BQ8N6M0 293 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 STOML2Q9UJZ1 356 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 MTO1Q9Y2Z2 717 aaKnown RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 KIAA0754O94854 1291 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 CXCL14O95715 111 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 MBL2P11226 248 aaPredicted RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 ARNTP27540 789 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 SPRP35270 261 aaPredicted RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 PDE1BQ01064 536 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 SPRED3Q2MJR0 410 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 PPM1JQ5JR12 505 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 PDPK2PQ6A1A2 396 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 TXNDC8Q6A555 127 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 OTOAQ7RTW8 1153 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 UBE2Q1Q7Z7E8 422 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 DCLK2Q8N568 766 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 ARL14EPQ8N8R7 260 aaPredicted RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 ARMC2Q8NEN0 867 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 PPHLN1Q8NEY8 458 aaKnown RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 PTCD2Q8WV60 388 aaKnown RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 BADQ92934 168 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 ISL2Q96A47 359 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 ZNF599Q96NL3 588 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 IQCGQ9H095 443 aaKnown RBP17.18■□□□□ 0.34
DDX41-201ENST00000330503 TRPC7Q9HCX4 862 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 TXNDC16Q9P2K2 825 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 ARL2BPQ9Y2Y0 163 aa17.18■□□□□ 0.34
DDX41-201ENST00000330503 KDELR3O43731 214 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 BGNP21810 368 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 GLDCP23378 1020 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 MAGEA12P43365 314 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 ABCG1P45844 678 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 LIMK2P53671 638 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 CREMQ03060 361 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 FSTL4Q6MZW2 842 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 CCDC121Q6ZUS5 278 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 CHST9Q7L1S5 443 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 ITIH5Q86UX2 942 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms