RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MSX2P35548 267 aaPredicted RBP15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 MAGEA3P43357 314 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 FKBP1BP68106 108 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 DCTN2Q13561 401 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 LRRC8BQ6P9F7 803 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 LRRTM3Q86VH5 581 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 RASAL3Q86YV0 1011 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 SPATA22Q8NHS9 363 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 PPP1R36Q96LQ0 422 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 ADAM2Q99965 735 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 FAM124BQ9H5Z6 455 aaPredicted RBP15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 TRMUO75648 421 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 GSRP00390 522 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 ELNP15502 786 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 NFKB1P19838 968 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 LRPAP1P30533 357 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 TBCCQ15814 346 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 C6orf52Q5T4I8 152 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PACS1Q6VY07 963 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 TAC4Q86UU9 113 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PHTF2Q8N3S3 785 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PNPLA1Q8N8W4 532 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 TRIB2Q92519 343 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 CDKL2Q92772 493 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 FRMD8Q9BZ67 464 aaPredicted RBP15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PNPLA8Q9NP80 782 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 CHRAC1Q9NRG0 131 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 GTF2IRD1Q9UHL9 959 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 AP4B1Q9Y6B7 739 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 TSHRP16473 764 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 COG7P83436 770 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 CDKL1Q00532 357 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 DPYSQ14117 519 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PDE1CQ14123 709 aaPredicted RBP15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PCBP1Q15365 356 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 FASTKD1Q53R41 847 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 C17orf99Q6UX52 265 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 AMIGO2Q86SJ2 522 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 IRGQQ8WZA9 623 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 TMIGD2Q96BF3 282 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 SLC38A7Q9NVC3 462 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 DMTF1Q9Y222 760 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 ZNF711Q9Y462 761 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PEX1O43933 1283 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 PPIDQ08752 370 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 LRRC39Q96DD0 335 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 MTG1Q9BT17 334 aaPredicted RBP15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 CEPT1Q9Y6K0 416 aa15.79■□□□□ 0.12
SHROOM1-201ENST00000319854 DCLK1O15075 740 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 ASGR1P07306 291 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 LHX1P48742 406 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 FLT3LGP49771 235 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 CNGA3Q16281 694 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 EML3Q32P44 896 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 IFNL1Q8IU54 200 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 FBXW8Q8N3Y1 598 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 OR10T2Q8NGX3 314 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 PNPOQ9NVS9 261 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 MOCS1Q9NZB8 636 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 VANGL2Q9ULK5 521 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 TMEM221A6NGB7 291 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 FBXO21O94952 628 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 MT-CYBP00156 380 aaPredicted RBP15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 POLBP06746 335 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 ARRB2P32121 409 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 MAGEA6P43360 314 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 STT3AP46977 705 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 RPL34P49207 117 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 SERPINB8P50452 374 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 STRA8Q7Z7C7 330 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 PQLC1Q8N2U9 271 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 ZBTB8BQ8NAP8 495 aaPredicted RBP15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 ACVR1CQ8NER5 493 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 GRIN3AQ8TCU5 1115 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 JADE3Q92613 823 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 SLC2A13Q96QE2 648 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 MRPS26Q9BYN8 205 aaKnown RBP15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 TIMMDC1Q9NPL8 285 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 FBXW11Q9UKB1 542 aa15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 PRG3Q9Y2Y8 225 aaPredicted RBP15.78■□□□□ 0.12
SHROOM1-201ENST00000319854 TRPA1O75762 1119 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 GRIK1P39086 918 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 ARL13BQ3SXY8 428 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 TEDDM1Q5T9Z0 273 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 NT5C3BQ969T7 300 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 SMARCD1Q96GM5 515 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 RTP3Q9BQQ7 232 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 THAP1Q9NVV9 213 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 ZNF180Q9UJW8 692 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 HACD1B0YJ81 288 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 CDH2P19022 906 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 AVPR1AP37288 418 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 ARPP19P56211 112 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 MPP3Q13368 585 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 UPP1Q16831 310 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 GALNT4Q8N4A0 578 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 PIWIL2Q8TC59 973 aaKnown RBP15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 INIPQ9NRY2 104 aa15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 ABI2Q9NYB9 513 aaPredicted RBP15.77■□□□□ 0.12
SHROOM1-201ENST00000319854 MPP6Q9NZW5 540 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms