RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 DEFA1P59665 94 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 DEFA3P59666 94 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 COTL1Q14019 142 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ZMYND11Q15326 602 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ZBTB37Q5TC79 503 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ARL6IP4Q66PJ3 421 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 RNF207Q6ZRF8 634 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 USP49Q70CQ1 688 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ZBTB46Q86UZ6 589 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ZNF786Q8N393 782 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ALKBH8Q96BT7 664 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 FOPNLQ96NB1 174 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 TINAGL1Q9GZM7 467 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 LRRC19Q9H756 370 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ACOT9Q9Y305 439 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 PREX2Q70Z35 1606 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 CEP170BQ9Y4F5 1589 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 C2orf74A8MZ97 194 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 FAM155AB1AL88 458 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 RGS5O15539 181 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 FABP1P07148 127 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 IL7P13232 177 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 DUSP4Q13115 394 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 SLC1A5Q15758 541 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 NAT8LQ8N9F0 302 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 SRFBP1Q8NEF9 429 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 ST8SIA2Q92186 375 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 LSM14BQ9BX40 385 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 YTHDF1Q9BYJ9 559 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 BLZF1Q9H2G9 400 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 RAB23Q9ULC3 237 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 MED16Q9Y2X0 877 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 MAGED1Q9Y5V3 778 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 ALBP02768 609 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 GNPDA1P46926 289 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 PPATQ06203 517 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 C1QBPQ07021 282 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 PDIA6Q15084 440 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 GEN1Q17RS7 908 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 PDE12Q6L8Q7 609 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 ZBTB33Q86T24 672 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ZBTB38Q8NAP3 1195 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 MCUQ8NE86 351 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 JDP2Q8WYK2 163 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ATP6V1E2Q96A05 226 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ITGA11Q9UKX5 1188 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 TRPC5Q9UL62 973 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 ACTL7AQ9Y615 435 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 A8MUA0 341 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 CDK1P06493 297 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 SERPINA6P08185 405 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 AKR1B1P15121 316 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 ALOX12P18054 663 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 CCR10P46092 362 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 SLC12A1Q13621 1099 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 MAN2A1Q16706 1144 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 PPP1R3AQ16821 1122 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 IQCCQ4KMZ1 466 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 PRR16Q569H4 304 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 ABRAXAS1Q6UWZ7 409 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 NT5DC3Q86UY8 548 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 SLC7A14Q8TBB6 771 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 TRIM43Q96BQ3 446 aaPredicted RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 EYA1Q99502 592 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 GTPBP2Q9BX10 602 aaKnown RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 CAB39LQ9H9S4 337 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 FARP1Q9Y4F1 1045 aaPredicted RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 SYNGAP1Q96PV0 1343 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 FAM189A1O60320 539 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 KCNK2O95069 426 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 APOL3O95236 402 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 LTA4HP09960 611 aaKnown RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 ACSL1P33121 698 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 CAP2P40123 477 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 PSMD4P55036 377 aaKnown RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 ERVK-8P63133 956 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 FASTKD3Q14CZ7 662 aaKnown RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 LDLRAP1Q5SW96 308 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 C5orf46Q6UWT4 87 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 NSMFQ6X4W1 530 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 SLC16A12Q6ZSM3 486 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 BNIPLQ7Z465 357 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 SLC9A9Q8IVB4 645 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 MAPKAPK5Q8IW41 473 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 ZBTB44Q8NCP5 570 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 SGTBQ96EQ0 304 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 QKIQ96PU8 341 aaKnown RBP eCLIP9.43□□□□□ -0.9
BDNF-201ENST00000314915 SERINC2Q96SA4 455 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 TMEM216Q9P0N5 145 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 CYTH4Q9UIA0 394 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 ACSL5Q9ULC5 683 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 PTPN22Q9Y2R2 807 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 GRIP1Q9Y3R0 1128 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 ARHGEF28Q8N1W1 1705 aaKnown RBP9.43□□□□□ -0.9
BDNF-201ENST00000314915 DLC1Q96QB1 1528 aa9.43□□□□□ -0.9
BDNF-201ENST00000314915 XDHP47989 1333 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms