RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 YIPF3Q9GZM5 350 aa15.44■□□□□ 0.06
SPIRE1-201ENST00000309836 AGO3Q9H9G7 860 aaKnown RBP15.44■□□□□ 0.06
SPIRE1-201ENST00000309836 SLC2A6Q9UGQ3 507 aa15.44■□□□□ 0.06
SPIRE1-201ENST00000309836 POMPQ9Y244 141 aa15.44■□□□□ 0.06
SPIRE1-201ENST00000309836 NLRC5Q86WI3 1866 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 PTPRDP23468 1912 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 NYNRINQ9P2P1 1898 aaKnown RBP15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 NEMP1O14524 444 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 DLX3O60479 287 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 MGEA5O60502 916 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 MAFKO60675 156 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 PAGE1O75459 146 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 CYP11A1P05108 521 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 CYP2C18P33260 490 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 CCNHP51946 323 aaPredicted RBP15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 NSUN2Q08J23 767 aaKnown RBP eCLIP15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 MGAT3Q09327 533 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 SLC12A1Q13621 1099 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 APLFQ8IW19 511 aaPredicted RBP15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 CEP97Q8IW35 865 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 PHC3Q8NDX5 983 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 JADE3Q92613 823 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 LENG8Q96PV6 779 aaPredicted RBP15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 ZNF385DQ9H6B1 395 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 NDFIP2Q9NV92 336 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 ZDHHC2Q9UIJ5 367 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 ADAMTS6Q9UKP5 1117 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 ARHGAP26Q9UNA1 814 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 AAR2Q9Y312 384 aaKnown RBP15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 TCAF1Q9Y4C2 921 aa15.43■□□□□ 0.06
SPIRE1-201ENST00000309836 MAGEA13PA6NCF6 341 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 MATN3O15232 486 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 HDAC3O15379 428 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 MSI1O43347 362 aaKnown RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 DDHD2O94830 711 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 VAPBO95292 243 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 CELF2O95319 508 aaKnown RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 HLA-DQB2P05538 268 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SERPINB5P36952 375 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 RPL14P50914 215 aaKnown RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 PRKAA2P54646 552 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 MTTPP55157 894 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 GRIK3Q13003 919 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 CTBP1Q13363 440 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 GSTA3Q16772 222 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 LSM12Q3MHD2 195 aaKnown RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 TCHHL1Q5QJ38 904 aaPredicted RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 PPM1LQ5SGD2 360 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 TSTD2Q5T7W7 516 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 BEND5Q7L4P6 421 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 TMC7Q7Z402 723 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 METTL23Q86XA0 190 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 FSTL5Q8N475 847 aaPredicted RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 C2orf69Q8N8R5 385 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SLC26A7Q8TE54 656 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 HASPINQ8TF76 798 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 CNDP1Q96KN2 507 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 PPP1R36Q96LQ0 422 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 NR1H4Q96RI1 486 aaPredicted RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 HAPLN3Q96S86 360 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 FTHL17Q9BXU8 183 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 VCXQ9H320 206 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SLC24A3Q9HC58 644 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SCOCQ9UIL1 159 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SSX2IPQ9Y2D8 614 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 FAM95CA0A1B0GW59 222 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 ANXA9O76027 345 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 POMCP01189 267 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 UBTFL6P0CB48 400 aaPredicted RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 COL6A2P12110 1019 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 EPHA3P29320 983 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 RGS2P41220 211 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 NAGLUP54802 743 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 GEMP55040 296 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 HNRNPDQ14103 355 aaKnown RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 BRMS1LQ5PSV4 323 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 AFMIDQ63HM1 303 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SEL1L3Q68CR1 1132 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SCD5Q86SK9 330 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 LCA5Q86VQ0 697 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SNX32Q86XE0 403 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 PPHLN1Q8NEY8 458 aaKnown RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 CASP10Q92851 521 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 NXNL1Q96CM4 212 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 TSNARE1Q96NA8 513 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 MTG1Q9BT17 334 aaPredicted RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 XPR1Q9UBH6 696 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SFMBT1Q9UHJ3 866 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 G3BP2Q9UN86 482 aaKnown RBP15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 ASB3Q9Y575 518 aa15.42■□□□□ 0.06
SPIRE1-201ENST00000309836 SCN10AQ9Y5Y9 1956 aa15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 H3BNX3 289 aa15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 M0QZQ0 153 aa15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 FGF10O15520 208 aaPredicted RBP15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 B3GAT3O94766 335 aa15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 JUNP05412 331 aaKnown RBP15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 DNAJB1P25685 340 aa15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 SLC1A2P43004 574 aa15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 CHRNA4P43681 627 aa15.41■□□□□ 0.06
SPIRE1-201ENST00000309836 HK2P52789 917 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms