RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 CCNYQ8ND76 341 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 GRIN3AQ8TCU5 1115 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 SIPA1Q96FS4 1042 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 RSPH9Q9H1X1 276 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 PRDM16Q9HAZ2 1276 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 EVLQ9UI08 416 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 R3HDM2Q9Y2K5 976 aaKnown RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 WASF2Q9Y6W5 498 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 ZSCAN5CA6NGD5 496 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 MID1O15344 667 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 IL1BP01584 269 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 PTPN7P35236 360 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 PSMD8P48556 350 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 RHOAP61586 193 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 PPIDQ08752 370 aaKnown RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 KLF1Q13351 362 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 TFDP2Q14188 446 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 KCTD19Q17RG1 926 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 CARD16Q5EG05 197 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 ARSIQ5FYB1 569 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 AADATQ8N5Z0 425 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 PCDH20Q8N6Y1 951 aaKnown RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 ZBTB44Q8NCP5 570 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 OR2AP1Q8NGE2 309 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 ACTL9Q8TC94 416 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 P3H4Q92791 437 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 ISG20Q96AZ6 181 aaKnown RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 HDAC11Q96DB2 347 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 TSGA13Q96PP4 275 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 HECAQ9UBI9 543 aaPredicted RBP9.24□□□□□ -0.93
PDE4D-201ENST00000309641 PPM1HQ9ULR3 514 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 CYP8B1Q9UNU6 501 aa9.24□□□□□ -0.93
PDE4D-201ENST00000309641 APOC4-APOC2K7ER74 178 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 KRIT1O00522 736 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 MATN3O15232 486 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 KIF5CO60282 957 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 LEFTY1O75610 366 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 ALDH1A2O94788 518 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 APOC2P02655 101 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 ZFXP17010 805 aaPredicted RBP9.23□□□□□ -0.93
PDE4D-201ENST00000309641 BCKDHBP21953 392 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 TGM2P21980 687 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 CCNCP24863 283 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 CHRNA3P32297 505 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 SLC8A1P32418 973 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 DRD3P35462 400 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 TPMTP51580 245 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 NUBP1P53384 320 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 GEMIN4P57678 1058 aaKnown RBP9.23□□□□□ -0.93
PDE4D-201ENST00000309641 OTUD4Q01804 1114 aaKnown RBP9.23□□□□□ -0.93
PDE4D-201ENST00000309641 AP1B1Q10567 949 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 ZBTB17Q13105 803 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 E2F5Q15329 346 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 CST6Q15828 149 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 MAP7D1Q3KQU3 841 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 TMCO4Q5TGY1 634 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 WDR5BQ86VZ2 330 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 RYBPQ8N488 228 aaPredicted RBP9.23□□□□□ -0.93
PDE4D-201ENST00000309641 CNTD1Q8N815 330 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 ATG4AQ8WYN0 398 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 MAML1Q92585 1016 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 PRCCQ92733 491 aaPredicted RBP9.23□□□□□ -0.93
PDE4D-201ENST00000309641 PSKH2Q96QS6 385 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 ZDHHC6Q9H6R6 413 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 ZSCAN32Q9NX65 697 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 SMARCAL1Q9NZC9 954 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 MBD1Q9UIS9 605 aaPredicted RBP9.23□□□□□ -0.93
PDE4D-201ENST00000309641 FANCMQ8IYD8 2048 aa9.23□□□□□ -0.93
PDE4D-201ENST00000309641 CXorf51AA0A1B0GTR3 108 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 A0A1W2PP55 124 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 PIGNO95427 931 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 JCHAINP01591 159 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CCNB1P14635 433 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 MX2P20592 715 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 P2RY2P41231 377 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 NR2C2P49116 596 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 GNG11P61952 73 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 PDK1Q15118 436 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 PRKD1Q15139 912 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 NOMO1Q15155 1222 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 MYLK3Q32MK0 819 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ZNF528Q3MIS6 628 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CCDC181Q5TID7 509 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 MARC1Q5VT66 337 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ZNF776Q68DI1 518 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 LONP2Q86WA8 852 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 PIP4K2CQ8TBX8 421 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 COG1Q8WTW3 980 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 OR8D1Q8WZ84 308 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ARRDC3Q96B67 414 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 MS4A14Q96JA4 679 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 PHOX2BQ99453 314 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 HEPHQ9BQS7 1158 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CINPQ9BW66 212 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CARD9Q9H257 536 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms