RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 FATE1Q969F0 183 aa13.1□□□□□ -0.31
APTX-201ENST00000309615 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.31
APTX-201ENST00000309615 FAM129BQ96TA1 746 aa13.1□□□□□ -0.31
APTX-201ENST00000309615 CINPQ9BW66 212 aaPredicted RBP13.1□□□□□ -0.31
APTX-201ENST00000309615 POLMQ9NP87 494 aaPredicted RBP13.1□□□□□ -0.31
APTX-201ENST00000309615 PRMT8Q9NR22 394 aaPredicted RBP13.1□□□□□ -0.31
APTX-201ENST00000309615 SMARCAL1Q9NZC9 954 aa13.1□□□□□ -0.31
APTX-201ENST00000309615 SEPT3Q9UH03 358 aa13.1□□□□□ -0.31
APTX-201ENST00000309615 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 H7C0C1 242 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 MCF2LO15068 1137 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 GJB3O75712 270 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 RBP3P10745 1247 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 TCP1P17987 556 aaKnown RBP13.09□□□□□ -0.31
APTX-201ENST00000309615 GABRG2P18507 467 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 NDUFV2P19404 249 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 MMP13P45452 471 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 ATP5OP48047 213 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 RENBPP51606 427 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 ZBTB17Q13105 803 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 XRCC4Q13426 336 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 ELAVL3Q14576 367 aaKnown RBP13.09□□□□□ -0.31
APTX-201ENST00000309615 ZNF235Q14590 738 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 LONRF2Q1L5Z9 754 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 SLC45A4Q5BKX6 768 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 CARD16Q5EG05 197 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 TEX26Q8N6G2 289 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 OR2AP1Q8NGE2 309 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 OR2T3Q8NH03 318 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 MRGPRX1Q96LB2 322 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 PSKH2Q96QS6 385 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 CEP41Q9BYV8 373 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 SEPT10Q9P0V9 454 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 CKAP5Q14008 2032 aa13.09□□□□□ -0.31
APTX-201ENST00000309615 HACD1B0YJ81 288 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 CES2O00748 559 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 APBB3O95704 486 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 GSRP00390 522 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 JCHAINP01591 159 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 CTSLP07711 333 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 PRLRP16471 622 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 CASQ1P31415 396 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 GKP32189 559 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 CCNHP51946 323 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 MAXP61244 160 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 SNRPD1P62314 119 aaKnown RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 IFI35P80217 286 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 CSTF1Q05048 431 aaKnown RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 DMWDQ09019 674 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 RYBPQ8N488 228 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 CAMKK1Q8N5S9 505 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 SLC35B2Q8TB61 432 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 OR8D1Q8WZ84 308 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 VOPP1Q96AW1 172 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 CCDC114Q96M63 670 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 GDAP1L1Q96MZ0 367 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 RSPH9Q9H1X1 276 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 NT5MQ9NPB1 228 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 RBM22Q9NW64 420 aaKnown RBP eCLIP13.08□□□□□ -0.32
APTX-201ENST00000309615 DNPEPQ9ULA0 475 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 TTC7AQ9ULT0 858 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 SAR1BQ9Y6B6 198 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 SHROOM3Q8TF72 1996 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 TTC24A2A3L6 582 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 RNF103O00237 685 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 INSIG1O15503 277 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 IGSF6O95976 241 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 TDGF1P13385 188 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 RBL1P28749 1068 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 DEKP35659 375 aaKnown RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 RPS14P62263 151 aaKnown RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 WASHC5Q12768 1159 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 MYLK3Q32MK0 819 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 DARS2Q6PI48 645 aaKnown RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 PGBD3Q8N328 593 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.08□□□□□ -0.32
APTX-201ENST00000309615 CNTD1Q8N815 330 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 GRIN3AQ8TCU5 1115 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 ACTRT1Q8TDG2 376 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 IL12RB2Q99665 862 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 MGME1Q9BQP7 344 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 ZDHHC6Q9H6R6 413 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 BCCIPQ9P287 314 aaKnown RBP eCLIP13.08□□□□□ -0.32
APTX-201ENST00000309615 EVLQ9UI08 416 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 SARDHQ9UL12 918 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 PPM1HQ9ULR3 514 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
APTX-201ENST00000309615 TTLL3Q9Y4R7 772 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 WASF2Q9Y6W5 498 aa13.08□□□□□ -0.32
APTX-201ENST00000309615 CACNA1IQ9P0X4 2223 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms