RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SCN4BQ8IWT1 228 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 EXOC8Q8IYI6 725 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ZFP28Q8NHY6 868 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 BTRCQ9Y297 605 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 CAPN14A8MX76 684 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 FAM72CH0Y354 149 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ERCC2P18074 760 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 IL4RP24394 825 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 SLC26A2P50443 739 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 BCAT1P54687 386 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 CDKL1Q00532 357 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 MYLK3Q32MK0 819 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 FAM72AQ5TYM5 149 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 FAM72DQ6L9T8 149 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 DNAJC14Q6Y2X3 702 aaPredicted RBP14.79□□□□□ -0.04
PTPN9-201ENST00000306726 FAM72BQ86X60 149 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 SLAIN1Q8ND83 568 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 DNAJB14Q8TBM8 379 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 FAM167AQ96KS9 214 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 NR1H4Q96RI1 486 aaPredicted RBP14.79□□□□□ -0.04
PTPN9-201ENST00000306726 EIF2AQ9BY44 585 aaKnown RBP14.79□□□□□ -0.04
PTPN9-201ENST00000306726 EFCAB1Q9HAE3 211 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ATP8B3O60423 1300 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 A0A0A0MRY4 1105 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ERI2A8K979 691 aaKnown RBP14.79□□□□□ -0.04
PTPN9-201ENST00000306726 BOLA2-SMG1P6H3BVE0 249 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ATP6V1G1O75348 118 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 TPP2P29144 1249 aaPredicted RBP14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ESRRGP62508 458 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 GPR107Q5VW38 600 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ZPBP2Q6X784 338 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 RELL1Q8IUW5 271 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 MIER2Q8N344 545 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 VPS50Q96JG6 964 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 SPATA13Q96N96 652 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 ANKRD27Q96NW4 1050 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 EPS8L2Q9H6S3 715 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 MAFO75444 373 aaPredicted RBP14.78□□□□□ -0.04
PTPN9-201ENST00000306726 CHRM3P20309 590 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 MAGP20916 626 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 CCNG1P51959 295 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 PDK2Q15119 407 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 TSPAN14Q8NG11 270 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 OR52K2Q8NGK3 314 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 BHMTQ93088 406 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 FICDQ9BVA6 458 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 POMKQ9H5K3 350 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 EMCNQ9ULC0 261 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 KPNA6O60684 536 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 YWHAQP27348 245 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 GSSP48637 474 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 RAP1GDS1P52306 607 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 STX1BP61266 288 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 XKR5Q6UX68 686 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 KYAT3Q6YP21 454 aaKnown RBP14.78□□□□□ -0.04
PTPN9-201ENST00000306726 B3GNT6Q6ZMB0 384 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 CDH19Q9H159 772 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 MMADHCQ9H3L0 296 aaPredicted RBP14.78□□□□□ -0.04
PTPN9-201ENST00000306726 LOXHD1Q8IVV2 1947 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 TMX2-CTNND1H3BSU7 103 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 INPP4BO15327 924 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 NCK1P16333 377 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 IGFBP6P24592 240 aaPredicted RBP14.78□□□□□ -0.04
PTPN9-201ENST00000306726 RPL5P46777 297 aaKnown RBP14.78□□□□□ -0.04
PTPN9-201ENST00000306726 TKTL1P51854 596 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 SEMA5AQ13591 1074 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 CEACAM7Q14002 265 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 PRAMEF19Q5SWL8 479 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 ZFP42Q96MM3 310 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 WBP1LQ9NX94 342 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 KIAA1217Q5T5P2 1943 aa14.78□□□□□ -0.04
PTPN9-201ENST00000306726 J3QRK9 145 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 DHRS4L1P0CG22 281 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 L1CAMP32004 1257 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 ADCYAP1R1P41586 468 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 SLC7A2P52569 658 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 YWHAHQ04917 246 aaPredicted RBP14.77□□□□□ -0.04
PTPN9-201ENST00000306726 FAM110BQ8TC76 370 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 FBXL8Q96CD0 374 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 C2orf40Q9H1Z8 148 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 TLE6Q9H808 572 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 PLEKHA5Q9HAU0 1116 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 LMCD1Q9NZU5 365 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 SLC2A6Q9UGQ3 507 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 E7ESA3 106 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 F8W8V4 182 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 TRDMT1O14717 391 aaKnown RBP14.77□□□□□ -0.04
PTPN9-201ENST00000306726 NOL3O60936 208 aaKnown RBP14.77□□□□□ -0.04
PTPN9-201ENST00000306726 ENDOD1O94919 500 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 RPL14P50914 215 aaKnown RBP14.77□□□□□ -0.04
PTPN9-201ENST00000306726 AP3M2P53677 418 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 CELF3Q5SZQ8 465 aaKnown RBP14.77□□□□□ -0.04
PTPN9-201ENST00000306726 C16orf89Q6UX73 402 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 NPLOC4Q8TAT6 608 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 FAM192AQ9GZU8 254 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 CDHR5Q9HBB8 845 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 FAM8A1Q9UBU6 413 aa14.77□□□□□ -0.04
PTPN9-201ENST00000306726 MAFBQ9Y5Q3 323 aaPredicted RBP14.77□□□□□ -0.04
PTPN9-201ENST00000306726 DYNC1LI2O43237 492 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms