RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ZNF419Q96HQ0 510 aaPredicted RBP12.32□□□□□ -0.44
HMGB2-201ENST00000296503 CELF6Q96J87 481 aaKnown RBP12.32□□□□□ -0.44
HMGB2-201ENST00000296503 HSPA12BQ96MM6 686 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 BAG1Q99933 345 aaPredicted RBP12.32□□□□□ -0.44
HMGB2-201ENST00000296503 SMOC1Q9H4F8 434 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 NOL6Q9H6R4 1146 aaKnown RBP12.32□□□□□ -0.44
HMGB2-201ENST00000296503 VPS45Q9NRW7 570 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 INTUQ9ULD6 942 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
HMGB2-201ENST00000296503 ACTL7AQ9Y615 435 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 A0A1W2PP55 124 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 IGLV3-19P01714 112 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ZNF806P0C7X5 589 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 C5AR1P21730 350 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 TGM1P22735 817 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ITPKAP23677 461 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ACSL1P33121 698 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SERPINH1P50454 418 aaKnown RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 NDST2P52849 883 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CORO7P57737 925 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 DPYSL2Q16555 572 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 PARP15Q460N3 678 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 C22orf39Q6P5X5 142 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 USP30Q70CQ3 517 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SLC41A1Q8IVJ1 513 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 C12orf50Q8NA57 414 aaPredicted RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 TEKT4Q8WW24 435 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 HMCESQ96FZ2 354 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CEP44Q9C0F1 390 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 NEUROG2Q9H2A3 272 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SGK2Q9HBY8 427 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 LUC7LQ9NQ29 371 aaKnown RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 EPN1Q9Y6I3 576 aaPredicted RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 NUP205Q92621 2012 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ZSCAN5CA6NGD5 496 aaPredicted RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 FAM47DPA6NHR8 397 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ARHGAP42A6NI28 874 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 MEI4A8MW99 385 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 C1QTNF3-AMACRE9PGA6 284 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ALOX15BO15296 676 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 C7P10643 843 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 AMPD1P23109 780 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CHRNA3P32297 505 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ARHGAP25P42331 645 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 LMAN1P49257 510 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CDH6P55285 790 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 GNG11P61952 73 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SLC25A11Q02978 314 aaKnown RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SERINC3Q13530 473 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SF3A2Q15428 464 aaKnown RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 POM121L1PQ3SYA9 428 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 ATP13A4Q4VNC1 1196 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CARD16Q5EG05 197 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 POLNQ7Z5Q5 900 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CPNE8Q86YQ8 564 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SYT12Q8IV01 421 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 C10orf67Q8IYJ2 551 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 PCDH20Q8N6Y1 951 aaKnown RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CADM4Q8NFZ8 388 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 OR2A12Q8NGT7 310 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 PIP4K2CQ8TBX8 421 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 RFFLQ8WZ73 363 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SLC39A8Q9C0K1 460 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 KLC2Q9H0B6 622 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 TMEM74BQ9NUR3 256 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CDC23Q9UJX2 597 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 SARDHQ9UL12 918 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 PPM1HQ9ULR3 514 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 PCDHA13Q9Y5I0 950 aa12.31□□□□□ -0.44
HMGB2-201ENST00000296503 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.31□□□□□ -0.44
HMGB2-201ENST00000296503 CEP192Q8TEP8 1941 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 PLXND1Q9Y4D7 1925 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
HMGB2-201ENST00000296503 CXorf51AA0A1B0GTR3 108 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 H3BQF6 201 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 DFFAO00273 331 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
HMGB2-201ENST00000296503 SEMA4FO95754 770 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 CD160O95971 181 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 MAOBP27338 520 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 DPP6P42658 865 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
HMGB2-201ENST00000296503 GTF2A1P52655 376 aaPredicted RBP12.3□□□□□ -0.44
HMGB2-201ENST00000296503 ARSIQ5FYB1 569 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 PLA2G2CQ5R387 149 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 DCAF12L1Q5VU92 463 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 DPY19L3Q6ZPD9 716 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 PRR23CQ6ZRP0 262 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 LZTR1Q8N653 840 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 NETO2Q8NC67 525 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 CHST14Q8NCH0 376 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 OR14C36Q8NHC7 312 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 MIR1-1HGQ9H1L0 117 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 PCDH18Q9HCL0 1135 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms