RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SLC26A2P50443 739 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 USP46P62068 366 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 YBX1P67809 324 aaKnown RBP17.04■□□□□ 0.32
SQLE-201ENST00000265896 PDAP1Q13442 181 aaKnown RBP17.04■□□□□ 0.32
SQLE-201ENST00000265896 DPYSQ14117 519 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 STRADAQ7RTN6 431 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 ARHGAP22Q7Z5H3 698 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 TMEM135Q86UB9 458 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 TMEM151AQ8N4L1 468 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 LRCH3Q96II8 777 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 NPY6RQ99463 290 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 CAAP1Q9H8G2 361 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 PREBQ9HCU5 417 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 V9GYQ6 96 aa17.04■□□□□ 0.32
SQLE-201ENST00000265896 MSI1O43347 362 aaKnown RBP17.03■□□□□ 0.32
SQLE-201ENST00000265896 NPR3P17342 541 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 CDH13P55290 713 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 MAXP61244 160 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 PTK2BQ14289 1009 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 MTX3Q5HYI7 312 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 ZNF470Q6ECI4 717 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 POTEAQ6S8J7 498 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 ZC3HC1Q86WB0 502 aaKnown RBP17.03■□□□□ 0.32
SQLE-201ENST00000265896 CPNE9Q8IYJ1 553 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 TXNDC5Q8NBS9 432 aaKnown RBP17.03■□□□□ 0.32
SQLE-201ENST00000265896 ZFAND2BQ8WV99 257 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 JADE3Q92613 823 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 FICDQ9BVA6 458 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 VCX3BQ9H321 246 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 POMKQ9H5K3 350 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 PLOD2O00469 737 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 CLIC3O95833 236 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 TAS2R39P59534 338 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 RARS2Q5T160 578 aaKnown RBP17.03■□□□□ 0.32
SQLE-201ENST00000265896 OGFRL1Q5TC84 451 aaPredicted RBP17.03■□□□□ 0.32
SQLE-201ENST00000265896 APBB2Q92870 758 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 DNAJB4Q9UDY4 337 aa17.03■□□□□ 0.32
SQLE-201ENST00000265896 A0A0G2JLL6 359 aaPredicted RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 HACD1B0YJ81 288 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 PPP6CO00743 305 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 SLC4A1P02730 911 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 PABPC4LP0CB38 370 aaKnown RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 SETSIPP0DME0 302 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 CYP2C9P11712 490 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 CYP2B6P20813 491 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 NOS2P35228 1153 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 PPARGP37231 505 aaPredicted RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 TAF6P49848 677 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 R3HDM1Q15032 1099 aaKnown RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 AGKQ53H12 422 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 PIGGQ5H8A4 983 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 TSTD2Q5T7W7 516 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 LIPMQ5VYY2 423 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 TWF2Q6IBS0 349 aaKnown RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 PRRT2Q7Z6L0 340 aaPredicted RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 ABTB1Q969K4 478 aaPredicted RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 DUSP16Q9BY84 665 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 VCX3AQ9NNX9 186 aa17.02■□□□□ 0.32
SQLE-201ENST00000265896 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
SQLE-201ENST00000265896 C7orf72A4D263 438 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 MAGEB3O15480 346 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 MT-ND1P03886 318 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 PGFP49763 221 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 C1QTNF8P60827 252 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 LSAMPQ13449 338 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 ZBTB6Q15916 424 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 DPP9Q86TI2 863 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 LINC01465Q8N7H1 131 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 OR6J1Q8NGC5 347 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 PDCD6IPQ8WUM4 868 aaKnown RBP17.02■□□□□ 0.31
SQLE-201ENST00000265896 HEXDCQ8WVB3 486 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 SLC29A1Q99808 456 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 WDCPQ9H6R7 721 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 COQ10BQ9H8M1 238 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 CRTAC1Q9NQ79 661 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 MPP6Q9NZW5 540 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 STAP1Q9ULZ2 295 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 RAP2CQ9Y3L5 183 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 PDE4DIPQ5VU43 2346 aa17.02■□□□□ 0.31
SQLE-201ENST00000265896 OR51F1A6NGY5 319 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 TREHO43280 583 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 ALOX15P16050 662 aaPredicted RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 ME2P23368 584 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 SCNN1BP51168 640 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 MAPK10P53779 464 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 SNX16P57768 344 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 COG7P83436 770 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 INSCQ1MX18 579 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 LRRC8EQ6NSJ5 796 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 CLEC14AQ86T13 490 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 ZDHHC17Q8IUH5 632 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 SCAMP5Q8TAC9 235 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 SNRNP27Q8WVK2 155 aaKnown RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 OSBPL2Q9H1P3 480 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 PIF1Q9H611 641 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 NOL11Q9H8H0 719 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms