RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CYLC1P35663 651 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ATP5C1P36542 298 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 DGKQP52824 942 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MFAP3P55082 362 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 RPL10AP62906 217 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 FLI1Q01543 452 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SLC39A6Q13433 755 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 CBX2Q14781 532 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SSX2Q16385 188 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TMEM44Q2T9K0 475 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 INAVAQ3KP66 663 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TMEM31Q5JXX7 168 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 FBXL19Q6PCT2 694 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 DEGS2Q6QHC5 323 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 FJX1Q86VR8 437 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KRT73Q86Y46 540 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 CDKL3Q8IVW4 592 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 PHC2Q8IXK0 858 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MCUQ8NE86 351 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF461Q8TAF7 563 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 KCNG4Q8TDN1 519 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ELP4Q96EB1 424 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 CCDC51Q96ER9 411 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 ADAD1Q96M93 576 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 BTBD9Q96Q07 612 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 MIPEPQ99797 713 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 CHID1Q9BWS9 393 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SUCOQ9UBS9 1254 aaKnown RBP7.85□□□□□ -1.15
GPNMB-201ENST00000258733 SLC22A14Q9Y267 594 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 VPS9D1Q9Y2B5 631 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 TESMINQ9Y4I5 508 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 HRH3Q9Y5N1 445 aa7.85□□□□□ -1.15
GPNMB-201ENST00000258733 NHSL1Q5SYE7 1610 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 LOC102724428A0A0B4J2F2 783 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 H3BNX3 289 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF701M0R085 212 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ATP2A1O14983 1001 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 LILRB5O75023 590 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 MFAP3LO75121 409 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 BMP15O95972 392 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 FCER2P06734 321 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 GNAO1P09471 354 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PSKH1P11801 424 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF23P17027 643 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 TCN1P20061 433 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 FGFR2P21802 821 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 STAT1P42224 750 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 MAGEA4P43358 317 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 GTF2A2P52657 109 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 AQP4P55087 323 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 SIK1P57059 783 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ERVFC1P60507 584 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 NKX3-2P78367 333 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 SLC3A1Q07837 685 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 GRB7Q14451 532 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PLA2G4FQ68DD2 849 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 SULT1C3Q6IMI6 304 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CFAP77Q6ZQR2 320 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 GPRIN3Q6ZVF9 776 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 GPR180Q86V85 440 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 C12orf40Q86WS4 652 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 NUDCD3Q8IVD9 361 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 GALNT12Q8IXK2 581 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 NAV1Q8NEY1 1877 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CLHC1Q8NHS4 586 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PXYLP1Q8TE99 480 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 SETD7Q8WTS6 366 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CA5BP1Q8WTZ4 195 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 UBLCP1Q8WVY7 318 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 MRPL48Q96GC5 212 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CCDC17Q96LX7 622 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 EYA3Q99504 573 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 VRK1Q99986 396 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 KIFC1Q9BW19 673 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 TEX12Q9BXU0 123 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 WDR12Q9GZL7 423 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CHMP1AQ9HD42 196 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 DLC1Q96QB1 1528 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 EFCAB10A6NFE3 127 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF623O75123 536 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CBR3O75828 277 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CBX6O95503 412 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 GNSP15586 552 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 OSBPP22059 807 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ITGB8P26012 769 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CPA2P48052 419 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 SERPINB9P50453 376 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 YARSP54577 528 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 RIN1Q13671 783 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 DHCR24Q15392 516 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PPP1R3AQ16821 1122 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 USP39Q53GS9 565 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PERM1Q5SV97 790 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 FAM171A1Q5VUB5 890 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CNGA4Q8IV77 575 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 RCOR2Q8IZ40 523 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 UBL4BQ8N7F7 174 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CD101Q93033 1021 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PTP4A1Q93096 173 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms