RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SPOCK2Q92563 424 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PELOQ9BRX2 385 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 KANSL2Q9H9L4 492 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LIN7BQ9HAP6 207 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 INIPQ9NRY2 104 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM86C1Q9NVL1 165 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ASH2LQ9UBL3 628 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PLEKHA6Q9Y2H5 1048 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PRELID3BQ9Y3B1 194 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC30A1Q9Y6M5 507 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 COL5A2P05997 1499 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 G3V2T6 193 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 HTR3BO95264 441 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PIGNO95427 931 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CD2P06729 351 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FABP1P07148 127 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GLI1P08151 1106 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CYP21A2P08686 494 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CHRM5P08912 532 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CSTF2P33240 577 aaKnown RBP eCLIP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GPC1P35052 558 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SPAM1P38567 509 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CARD18P57730 90 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 RPP30P78346 268 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SP140Q13342 867 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 BTN1A1Q13410 526 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PDIA6Q15084 440 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SKIV2LQ15477 1246 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 TTC38Q5R3I4 469 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM180AQ6UWF9 173 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MAMSTRQ6ZN01 415 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SSX6Q7RTT6 188 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF280BQ86YH2 543 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF34Q8IZ26 560 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FITM2Q8N6M3 262 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 BLOC1S5Q8TDH9 187 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SHC3Q92529 594 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PPP3R2Q96LZ3 170 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ERMAPQ96PL5 475 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CD93Q9NPY3 652 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 UBQLN2Q9UHD9 624 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 VPS9D1Q9Y2B5 631 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CRYL1Q9Y2S2 319 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MAB21L2Q9Y586 359 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CAPN8A6NHC0 703 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LRRC53A6NM62 1247 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LOC110117498-PIK3R3F6TDL0 507 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 H6PDO95479 791 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 C9P02748 559 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 JUPP14923 745 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MMP8P22894 467 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 AP1S2P56377 157 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GALK2Q01415 458 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GRB14Q14449 540 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 NR1I3Q14994 352 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 NECTIN1Q15223 517 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM189A2Q15884 450 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM153CQ494X1 144 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 EARS2Q5JPH6 523 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GPRC6AQ5T6X5 926 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 C4orf33Q8N1A6 199 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CHPT1Q8WUD6 406 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 RBM15Q96T37 977 aaKnown RBP eCLIP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ZBTB18Q99592 522 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 COPS7BQ9H9Q2 264 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ATP13A2Q9NQ11 1180 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SEC14L4Q9UDX3 406 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SETD1BQ9UPS6 1966 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 TNKSO95271 1327 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CNTNAP4Q9C0A0 1308 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 A0A1W2PQC6 194 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SMAD9O15198 467 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 GTPBP6O43824 516 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 TBX10O75333 385 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 OR2B3O76000 313 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 S100A8P05109 93 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PGK2P07205 417 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 LTA4HP09960 611 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 CCNB1P14635 433 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 HPGDP15428 266 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 NFKB1P19838 968 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MAGP20916 626 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 DNAJB2P25686 324 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 HOXA7P31268 230 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 DPYDQ12882 1025 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MSANTD2Q6P1R3 559 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 RD3Q7Z3Z2 195 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM160B2Q86V87 743 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 ZSWIM2Q8NEG5 633 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 NSUN6Q8TEA1 469 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SDR42E1Q8WUS8 393 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 KCNN1Q92952 543 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 C12orf43Q96C57 262 aaKnown RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MASTLQ96GX5 879 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 OXNAD1Q96HP4 312 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 MYL10Q9BUA6 226 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 KCNN2Q9H2S1 579 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms