RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 LGALS2P05162 132 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 BMP1P13497 986 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 GRK2P25098 689 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 PRKAR1BP31321 381 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 KRT20P35900 424 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 BNC1Q01954 994 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 ACAP2Q15057 778 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 ZNF174Q15697 407 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 CCNG2Q16589 344 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 HABP4Q5JVS0 413 aaKnown RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 RBM20Q5T481 1227 aaKnown RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 C6orf52Q5T4I8 152 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 PRR23BQ6ZRT6 265 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 LIMS2Q7Z4I7 341 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 PPP1R13LQ8WUF5 828 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 SEPT1Q8WYJ6 367 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 CMTM5Q96DZ9 223 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 TRIM56Q9BRZ2 755 aaKnown RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 NPLQ9BXD5 320 aaPredicted RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 NANOGQ9H9S0 305 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 AKIP1Q9NQ31 210 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 TBC1D22BQ9NU19 505 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 SLC39A1Q9NY26 324 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 PKD2L2Q9NZM6 624 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 ENPP5Q9UJA9 477 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 ANAPC5Q9UJX4 755 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 LTBP2Q14767 1821 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 C1orf232A0A0U1RR37 186 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 C2orf81A6NN90 581 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 DDX39AO00148 427 aaKnown RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 HAS3O00219 553 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 CYP26A1O43174 497 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 SLC37A4O43826 429 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 EXTL3O43909 919 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 RFPL2O75678 378 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 JUNBP17275 347 aaPredicted RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 NR4A1P22736 598 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 EVI2BP34910 448 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 IDUAP35475 653 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 TALDO1P37837 337 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 PSEN2P49810 448 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 COPAP53621 1224 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 ACTR2P61160 394 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 NAB1Q13506 487 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 IRAK1BP1Q5VVH5 260 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 GTF2IRD2BQ6EKJ0 949 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 GTF2IRD2Q86UP8 949 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 SNX32Q86XE0 403 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 FIBCD1Q8N539 461 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 FNIP1Q8TF40 1166 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 SLC5A5Q92911 643 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 FAM149B1Q96BN6 582 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 INTS12Q96CB8 462 aaKnown RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 OMA1Q96E52 524 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 PRR11Q96HE9 360 aaPredicted RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 ZNF560Q96MR9 790 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 TOX2Q96NM4 488 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 OPALINQ96PE5 141 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 NAP1L4Q99733 375 aaKnown RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 C17orf62Q9BQA9 187 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 KATNAL1Q9BW62 490 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 RAD21L1Q9H4I0 556 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 CD93Q9NPY3 652 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 EMC3Q9P0I2 261 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 PSME2Q9UL46 239 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 CAB39Q9Y376 341 aaPredicted RBP12□□□□□ -0.49
CCNA1-201ENST00000255465 UGT2A1Q9Y4X1 527 aa12□□□□□ -0.49
CCNA1-201ENST00000255465 TRPC5OSA6NMA1 111 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 PI4K2BG5E9Z4 385 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 H3BRB1 525 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 FGF18O76093 207 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 EPN2O95208 641 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 ATG7O95352 703 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 CCNE2O96020 404 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 SNRPAP09012 282 aaKnown RBP11.99□□□□□ -0.49
CCNA1-201ENST00000255465 FGFR1P11362 822 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 KRT10P13645 584 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 ATF2P15336 505 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 GARTP22102 1010 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 IL10P22301 178 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 IVDP26440 423 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 MAP4P27816 1152 aaKnown RBP11.99□□□□□ -0.49
CCNA1-201ENST00000255465 ARL1P40616 181 aaPredicted RBP11.99□□□□□ -0.49
CCNA1-201ENST00000255465 CASP3P42574 277 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 CPA2P48052 419 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 COPZ1P61923 177 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 TMPRSS15P98073 1019 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 FKBP3Q00688 224 aaKnown RBP11.99□□□□□ -0.49
CCNA1-201ENST00000255465 FAAP100Q0VG06 881 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 MFSD10Q14728 455 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 INAVAQ3KP66 663 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 FGD3Q5JSP0 725 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 PAOXQ6QHF9 649 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 KIAA0408Q6ZU52 694 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 SLC13A5Q86YT5 568 aaPredicted RBP11.99□□□□□ -0.49
CCNA1-201ENST00000255465 HPS6Q86YV9 775 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 FAM126BQ8IXS8 530 aa11.99□□□□□ -0.49
CCNA1-201ENST00000255465 BCL7CQ8WUZ0 217 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms