RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SERHL2Q9H4I8 314 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 POLR1BQ9H9Y6 1135 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 SERHLQ9NQF3 203 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CCNDBP1O95273 360 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 GJB1P08034 283 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 VAV1P15498 845 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CXCR2P25025 360 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 TLX1P31314 330 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 CRATP43155 626 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 GSTM5P46439 218 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 TTPAP49638 278 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 RPL14P50914 215 aaKnown RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 NUP107P57740 925 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 PURAQ00577 322 aaKnown RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 TCEA2Q15560 299 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 MEA1Q16626 185 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CCDC92Q53HC0 331 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 COLGALT2Q8IYK4 626 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ITFG1Q8TB96 612 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 GPR152Q8TDT2 470 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ZBTB10Q96DT7 871 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 HTATIP2Q9BUP3 242 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 POLR1DQ9Y2S0 133 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 ARIH1Q9Y4X5 557 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 ROBO1Q9Y6N7 1651 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 BTNL10A8MVZ5 291 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 AGRPO00253 132 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 PHGDHO43175 533 aaKnown RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 AP5Z1O43299 807 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 NBNO60934 754 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 FARP2O94887 1054 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 LBPP18428 481 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 TM4SF1P30408 202 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 CRADDP78560 199 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 PFKFB4Q16877 469 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 PLA2G4EQ3MJ16 856 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 WASHC2DQ5SRD0 308 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 PHF13Q86YI8 300 aaPredicted RBP8.81□□□□□ -1
PTCD3-201ENST00000254630 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 BRD9Q9H8M2 597 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 VPS4AQ9UN37 437 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 AP3M1Q9Y2T2 418 aa8.81□□□□□ -1
PTCD3-201ENST00000254630 SMIM35A0A1B0GVV1 85 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 B4GALT5O43286 388 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 OR6A2O95222 327 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 IFNA16P05015 189 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 ITGAVP06756 1048 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FGRP09769 529 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 CHKAP35790 457 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 CCR4P51679 360 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 RAD23AP54725 363 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 MIIPQ5JXC2 388 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 C16orf62Q7Z3J2 963 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 RBM23Q86U06 439 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 OR6Y1Q8NGX8 325 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 IL31RAQ8NI17 732 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 AENQ8WTP8 325 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 OR8D1Q8WZ84 308 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 LRRC39Q96DD0 335 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FANCEQ9HB96 536 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 KLQ9UEF7 1012 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 CORO2BQ9UQ03 480 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 A0A1W2PQH9 124 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 NEDD8-MDP1E9PL57 170 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FCHO1O14526 889 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 INPP4BO15327 924 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 CD3EAPO15446 510 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 CTPS1P17812 591 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 TNFRSF8P28908 595 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 PPM1AP35813 382 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 ST13P50502 369 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 PLK1P53350 603 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 MRPS5P82675 430 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 FRG1Q14331 258 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 ALG11Q2TAA5 492 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 TRMT5Q32P41 509 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 GET4Q7L5D6 327 aaPredicted RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 ATL1Q8WXF7 558 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 MCCC1Q96RQ3 725 aaPredicted RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 DUSP16Q9BY84 665 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SLITRK2Q9H156 845 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 A0A0B4J269 797 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SCAMP3O14828 347 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 ATP9AO75110 1047 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 CAPN15O75808 1086 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SP100P23497 879 aaPredicted RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 CDC25CP30307 473 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 DGKKQ5KSL6 1271 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 PPP1R15BQ5SWA1 713 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FAM46CQ5VWP2 391 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SERPINA13PQ6UXR4 307 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 GLIS3Q8NEA6 775 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 HSFY1Q96LI6 401 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 NDNQ99608 321 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 ATAD3AQ9NVI7 634 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 GEMIN8Q9NWZ8 242 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 PTCH2Q9Y6C5 1203 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FAM58BPP0C7Q3 252 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms