RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 ATAD5Q96QE3 1844 aa3.6□□□□□ -1.83
PHTF2-201ENST00000248550 GSG1L2A8MUP6 293 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 TPP1O14773 563 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 FSCN2O14926 492 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SLC16A4O15374 487 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 RAD51CO43502 376 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 KIAA0754O94854 1291 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ARIH2O95376 493 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ITGA2BP08514 1039 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ZSCAN22P10073 491 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 EPHA8P29322 1005 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 DEKP35659 375 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CTBP2P56545 445 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CCT2P78371 535 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 GRIK2Q13002 908 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 GLRA4Q5JXX5 417 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 WLSQ5T9L3 541 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 MLIPQ5VWP3 458 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 DENND2CQ68D51 928 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 TANGO2Q6ICL3 276 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 BHLHB9Q6PI77 547 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PARM1Q6UWI2 310 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 NAPRTQ6XQN6 538 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 Q6ZSR6 202 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SLC9A9Q8IVB4 645 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 LGI2Q8N0V4 545 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ARFGAP1Q8N6T3 406 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PIGTQ969N2 578 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PRICKLE1Q96MT3 831 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CSPG4P5Q96PW8 444 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 DPH2Q9BQC3 489 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ZNF717Q9BY31 904 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 MTMR12Q9C0I1 747 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 KRT82Q9NSB4 513 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 OLAHQ9NV23 265 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PANK4Q9NVE7 773 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 GEMIN8Q9NWZ8 242 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CALCOCO1Q9P1Z2 691 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 MACROD2A1Z1Q3 448 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 HAS3O00219 553 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PRPSAP2O60256 369 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 RFPL2O75678 378 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 EGFP01133 1207 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 MYL1P05976 194 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ELFN1P0C7U0 828 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 TNFAIP3P21580 790 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 OTX2P32243 289 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 GUCY1A2P33402 732 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 GJA4P35212 333 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 NDST2P52849 883 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ALDH6A1Q02252 535 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 DMTNQ08495 405 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 NIPAL4Q0D2K0 466 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ELAVL3Q14576 367 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 COL19A1Q14993 1142 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PFKFB3Q16875 520 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 TCP11X2Q5H9J9 407 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 DCAF17Q5H9S7 520 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 DNTTIP2Q5QJE6 756 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 LCE2DQ5TA82 110 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 TRIM72Q6ZMU5 477 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SMC5Q8IY18 1101 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 GSPT2Q8IYD1 628 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 MMGT1Q8N4V1 131 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PCDH20Q8N6Y1 951 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 KDM1BQ8NB78 822 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 MAIP1Q8WWC4 291 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 NELL1Q92832 810 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ZNF274Q96GC6 653 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CPB2Q96IY4 423 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CASD1Q96PB1 797 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CD180Q99467 661 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 EBNA1BP2Q99848 306 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 AP1M1Q9BXS5 423 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 BEX2Q9BXY8 128 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SDHAF3Q9NRP4 125 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 ASNSD1Q9NWL6 643 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 NMRK1Q9NWW6 199 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 UBAP1Q9NZ09 502 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 IFT80Q9P2H3 777 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 GHRLQ9UBU3 117 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SLC13A4Q9UKG4 626 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PCDHB14Q9Y5E9 798 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 FKBP7Q9Y680 259 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SCN9AQ15858 1988 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CLDN4O14493 209 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 UBFD1O14562 309 aaKnown RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 TP53I11O14683 189 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 KRT33AO76009 404 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SYNGR4O95473 234 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CHRM3P20309 590 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 KRT85P78386 507 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 TARDBPQ13148 414 aaKnown RBP eCLIP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 LRRC14Q15048 493 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 PRKD1Q15139 912 aaPredicted RBP3.59□□□□□ -1.83
PHTF2-201ENST00000248550 MOGQ16653 247 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 WDR72Q3MJ13 1102 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 FAM26FQ5R3K3 315 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 SEZ6L2Q6UXD5 910 aa3.59□□□□□ -1.83
PHTF2-201ENST00000248550 CCNI2Q6ZMN8 369 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms