RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FCRL5Q96RD9 977 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 MAGEH1Q9H213 219 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF334Q9HCZ1 680 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-201ENST00000238688 CFAP54Q96N23 3096 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 GPR179Q6PRD1 2367 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 SDR42E2A6NKP2 422 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 STK25O00506 426 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 POLR3GO15318 223 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 COCHO43405 550 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 MAFKO60675 156 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 RAMP2O60895 175 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 SHOX2O60902 331 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 F11P03951 625 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 MYL4P12829 197 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 TACR2P21452 398 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 CES1P23141 567 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 GEMP55040 296 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 OXCT1P55809 520 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 GEMIN4P57678 1058 aaKnown RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 SLC7A9P82251 487 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 IL10RBQ08334 325 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 RFTN1Q14699 578 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 TERF2Q15554 542 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 TEAD2Q15562 447 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 BBS9Q3SYG4 887 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 FBXL22Q6P050 247 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 VITQ6UXI7 678 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 PRUNE1Q86TP1 453 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 CAND1Q86VP6 1230 aaKnown RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 MAML2Q8IZL2 1156 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF687Q8N1G0 1237 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 BBS5Q8N3I7 341 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF557Q8N988 423 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 FBXO36Q8NEA4 188 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 CENPTQ96BT3 561 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 C9orf72Q96LT7 481 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 RPRD1AQ96P16 312 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 EBNA1BP2Q99848 306 aaKnown RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 MAGEB5Q9BZ81 275 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 VPS37BQ9H9H4 285 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 TRPV4Q9HBA0 871 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 SSU72Q9NP77 194 aaKnown RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 EURLQ9NYK6 297 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 PSMC3IPQ9P2W1 217 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF212Q9UDV6 495 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 RSPH14Q9UHP6 348 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 LSM7Q9UK45 103 aaKnown RBP13.44□□□□□ -0.26
SLIRP-201ENST00000238688 VANGL2Q9ULK5 521 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 SIT1Q9Y3P8 196 aa13.44□□□□□ -0.26
SLIRP-201ENST00000238688 ATG2BQ96BY7 2078 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 A0A1B0GVM2 712 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 KANSL1LA0AUZ9 987 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 ILVBLA1L0T0 632 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 PRR23AA6NEV1 266 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 TCAF2A6NFQ2 919 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 GFRA3O60609 400 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 FAM155BO75949 473 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 STC2O76061 302 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 METTL18O95568 372 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 CPP00450 1065 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 SHBGP04278 402 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 CD72P21854 359 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 CNTFP26441 200 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 VIPR2P41587 438 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 NPY2RP49146 381 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 PPP2R2AP63151 447 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 PRKCQQ04759 706 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 GRM2Q14416 872 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 FNBP1LQ5T0N5 605 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 MPP7Q5T2T1 576 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 STXBP5Q5T5C0 1151 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 LGSNQ5TDP6 509 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 STEAP4Q687X5 459 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 KCTD11Q693B1 232 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 C3orf62Q6ZUJ4 267 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 FAM217AQ8IXS0 508 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 TEX26Q8N6G2 289 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 GSDMBQ8TAX9 411 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 ZSCAN18Q8TBC5 510 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-201ENST00000238688 SMARCD2Q92925 531 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 TTC17Q96AE7 1141 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 ALKBH8Q96BT7 664 aaKnown RBP13.43□□□□□ -0.26
SLIRP-201ENST00000238688 C10orf88Q9H8K7 445 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 IL21Q9HBE4 155 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 ZFP14Q9HCL3 533 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 LTB4R2Q9NPC1 389 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 ASAH2Q9NR71 780 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 BFARQ9NZS9 450 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 ZC3H7BQ9UGR2 993 aaKnown RBP13.43□□□□□ -0.26
SLIRP-201ENST00000238688 IPO11Q9UI26 975 aaKnown RBP13.43□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF180Q9UJW8 692 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 MFHAS1Q9Y4C4 1052 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 IKBKGQ9Y6K9 419 aa13.43□□□□□ -0.26
SLIRP-201ENST00000238688 A0A1W2PRU2 124 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 TCRBV7S3A2A0A539 114 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 DFFAO00273 331 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 ARNTLO00327 626 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms