RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 HDDC3Q8N4P3 179 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 ACRBPQ8NEB7 543 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 TMIEQ8NEW7 156 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 PIGKQ92643 395 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 BIRC7Q96CA5 298 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 RMDN1Q96DB5 314 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 SPACA7Q96KW9 195 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 HINFPQ9BQA5 517 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 CEP44Q9C0F1 390 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 DEF6Q9H4E7 631 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 CATSPERBQ9H7T0 1116 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 RAB23Q9ULC3 237 aa13.98□□□□□ -0.17
VEGFA-201ENST00000230480 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-201ENST00000230480 NCOR2Q9Y618 2525 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 LNP1A1A4G5 178 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 BUB1BO60566 1050 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-201ENST00000230480 LEFTY1O75610 366 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 TMCC1O94876 653 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 IL1BP01584 269 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 DNTTP04053 509 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 TPM1P09493 284 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 KCNA4P22459 653 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 OXTRP30559 389 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 CCNHP51946 323 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-201ENST00000230480 ADPRHP54922 357 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 PPP2CBP62714 309 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 PPP2CAP67775 309 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 TAZQ16635 292 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 INO80DQ53TQ3 878 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-201ENST00000230480 DCAF12L1Q5VU92 463 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 LYSMD4Q5XG99 296 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 NCBP2-AS2Q69YL0 99 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 RETSATQ6NUM9 610 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 ZSCAN30Q86W11 494 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 SYT12Q8IV01 421 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 PCDH20Q8N6Y1 951 aaKnown RBP13.97□□□□□ -0.17
VEGFA-201ENST00000230480 SPC24Q8NBT2 197 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 OR6K2Q8NGY2 324 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 LRRN4Q8WUT4 740 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
VEGFA-201ENST00000230480 NCAPGQ9BPX3 1015 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 TM6SF2Q9BZW4 377 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 VPS45Q9NRW7 570 aa13.97□□□□□ -0.17
VEGFA-201ENST00000230480 TMEM110-MUSTN1A8MSY1 372 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 PJA2O43164 708 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 BUB1O43683 1085 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 BNIP3LO60238 219 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 MAFKO60675 156 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 SEMA4FO95754 770 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 ITIH2P19823 946 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 COMTP21964 271 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 KDELR1P24390 212 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 NNMTP40261 264 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 ARHGAP25P42331 645 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 ID4P47928 161 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 MARCKSL1P49006 195 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 CDH6P55285 790 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 ADCY2Q08462 1091 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 TSR1Q2NL82 804 aaKnown RBP13.96□□□□□ -0.17
VEGFA-201ENST00000230480 ANKRD20A8PQ5CZ79 823 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 SLC23A3Q6PIS1 610 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 NCEH1Q6PIU2 408 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-201ENST00000230480 CYP2U1Q7Z449 544 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 MTERF4Q7Z6M4 381 aaKnown RBP13.96□□□□□ -0.17
VEGFA-201ENST00000230480 TMTC1Q8IUR5 882 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 RHOT2Q8IXI1 618 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 PGBD5Q8N414 524 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 OR8D1Q8WZ84 308 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 HERPUD2Q9BSE4 406 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 BTBD1Q9H0C5 482 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 SGK2Q9HBY8 427 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 EVLQ9UI08 416 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-201ENST00000230480 EIF2B4Q9UI10 523 aaKnown RBP13.96□□□□□ -0.17
VEGFA-201ENST00000230480 FZD4Q9ULV1 537 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 SCML1Q9UN30 329 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 ALG6Q9Y672 507 aa13.96□□□□□ -0.17
VEGFA-201ENST00000230480 TTC24A2A3L6 582 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 H3BRJ5 948 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 LATO43561 262 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 PLRG1O43660 514 aaKnown RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 RNASEH2AO75792 299 aaKnown RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 ADH1BP00325 375 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 GSRP00390 522 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 WNT1P04628 370 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 ACADMP11310 421 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 CR2P20023 1033 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 ETFBP38117 255 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 ABL2P42684 1182 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 ZNF135P52742 658 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 SLC10A7Q0GE19 358 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 FGL2Q14314 439 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 PAFAH1B3Q15102 231 aaKnown RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 MYLK3Q32MK0 819 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 KIAA0895LQ68EN5 471 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 ZSWIM9Q86XI8 627 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 PLD5Q8N7P1 536 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 TSEN2Q8NCE0 465 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms