RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ANKRD52Q8NB46 1076 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF669Q96BR6 464 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 POM121Q96HA1 1249 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 DHRS1Q96LJ7 313 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 PPP1R10Q96QC0 940 aaKnown RBP9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 SACM1LQ9NTJ5 587 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 DNAJC28Q9NX36 388 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 GTF2IRD1Q9UHL9 959 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZSWIM8A7E2V4 1837 aa9.55□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF487B1APH4 448 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 G3V2L1 256 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 H3BNX3 289 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 POLBP06746 335 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 TPH1P17752 444 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 NAT1P18440 290 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GRK2P25098 689 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GP5P40197 560 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 POU5F1BQ06416 359 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ADIGQ0VDE8 80 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 MARCH8Q5T0T0 291 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 RNF19BQ6ZMZ0 732 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 RNF139Q8WU17 664 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 CLIP3Q96DZ5 547 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 FERMT1Q9BQL6 677 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 NXF3Q9H4D5 531 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 CSADQ9Y600 493 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 I6L893 689 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 CBFA2T3O75081 653 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 HSPA4LO95757 839 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ATP5BP06576 529 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 SAT1P21673 171 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GNL1P36915 607 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GRM5P41594 1212 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 NR1H2P55055 460 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 KLF10Q13118 480 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 HNRNPDQ14103 355 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 CERCAMQ5T4B2 595 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 MAMDC4Q6UXC1 1216 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 HFE2Q6ZVN8 426 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARMCX2Q7L311 632 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 PIGZQ86VD9 579 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZDHHC17Q8IUH5 632 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 FBXW8Q8N3Y1 598 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 HPS1Q92902 700 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 CMTM5Q96DZ9 223 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 SENP6Q9GZR1 1112 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM49AQ9H0Q0 323 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 TRPV6Q9H1D0 765 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 SF3B1O75533 1304 aaKnown RBP eCLIP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 A0A096LPK6 155 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GLTPD2A6NH11 291 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ADAM23O75077 832 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GMNNO75496 209 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 CDH2P19022 906 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ACAT1P24752 427 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 MATKP42679 507 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 NUDT2P50583 147 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 BCAT1P54687 386 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 FLOT2Q14254 428 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 PPP2R5DQ14738 602 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZBTB6Q15916 424 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 C9orf57Q5W0N0 161 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARHGAP17Q68EM7 881 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 NXNQ6DKJ4 435 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 EPGNQ6UW88 154 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ADGRG6Q86SQ4 1221 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF786Q8N393 782 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 TTC39CQ8N584 583 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 GFM2Q969S9 779 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 RBBP8Q99708 897 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 C16orf70Q9BSU1 422 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 MRPS26Q9BYN8 205 aaKnown RBP9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 UBP1Q9NZI7 540 aa9.54□□□□□ -0.88
HLA-DOA-201ENST00000229829 A0A0G2JLL6 359 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 FUOMA2VDF0 154 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 M0QYT0 321 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 MATN2O00339 956 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 DNAJA2O60884 412 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 THRAP10827 490 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 MPSTP25325 297 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 EPHA3P29320 983 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SOX11P35716 441 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 IFRD2Q12894 506 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 TAPT1Q6NXT6 567 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 PRRT2Q7Z6L0 340 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZNF410Q86VK4 478 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM156AQ8NDB6 213 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 GATA5Q9BWX5 397 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 UNKQ9C0B0 810 aaKnown RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 CDH19Q9H159 772 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 STN1Q9H668 368 aaKnown RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 CHRAC1Q9NRG0 131 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 KLHL8Q9P2G9 620 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SSX2IPQ9Y2D8 614 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 PCDHB12Q9Y5F1 795 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms