RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 CdonQ32MD9 1250 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Hp1bp3Q3TEA8 554 aaKnown RBP11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cmpk2Q3U5Q7 447 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Ndst1Q3UHN9 882 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Chi3l1Q61362 389 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Ifi47Q61635 420 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Mrgprx1Q8CIP3 322 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Slc8a2Q8K596 921 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 CrygnQ8VHL5 183 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Asb11Q9CQ31 323 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Ankrd61Q9CQM6 421 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cnot11Q9CWN7 505 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Tjp3Q9QXY1 905 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Spata31d1aE9QA35 1336 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Flt1P35969 1333 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Lilra5D3Z7A9 295 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Gm8267E9Q207 261 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Smim18J3QNP2 93 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Mapk12O08911 367 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Eif3dO70194 548 aaKnown RBP11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 C9P06683 548 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cd2P08920 344 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Micall2Q3TN34 1009 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Gm648Q3UJ22 213 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cdk10Q3UMM4 360 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 EndouQ3V188 412 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 PfplQ5RKV8 702 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Nsun6Q7TS68 476 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 SvopQ8BFT9 548 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 SybuQ8BHS8 665 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Ticam2Q8BJQ4 232 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 AgmoQ8BS35 447 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Slc26a6Q8CIW6 758 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Vmn1r185Q8R299 319 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Mmgt2Q8R3L0 123 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Mul1Q8VCM5 352 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Krcc1Q99JT5 256 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Serpinb11Q9CQV3 388 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Dnajb4Q9D832 337 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Ddx24Q9ESV0 857 aaKnown RBP11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Pds5aQ6A026 1332 aa11.62□□□□□ -0.55
Ssh1-201ENSMUST00000077689 DgkdE9PUQ8 1220 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 E230025N22RikG5E8S3 482 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Ppargc1aO70343 797 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Serpinh1P19324 417 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cd68P31996 326 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Wnt10bP48614 389 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Atp5bP56480 529 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Polr2iP60898 125 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Lsm3P62311 102 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 SgcdP82347 289 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Gm11992Q5SS90 291 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 ProcrQ64695 242 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 NfascQ810U3 1240 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Nuak2Q8BZN4 639 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Elf5Q8VDK3 253 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Vps4aQ8VEJ9 437 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cd2bp2Q9CWK3 342 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cpxm2Q9D2L5 764 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 AgkQ9ESW4 421 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Htr3bQ9JHJ5 437 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Kcnt2D3Z649 1135 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Trim5E9PV98 497 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 ClockO08785 855 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 GsnP13020 780 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Gnl1P36916 607 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 LipeP54310 759 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Uchl4P58321 233 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Samd12Q0VE29 161 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Q3TQQ9 903 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Pydc3Q3V3Q4 588 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Clec12aQ504P2 267 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Abcb7Q61102 752 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 FcgrtQ61559 365 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Znf366Q6NS86 746 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Bhlhb9Q6PB60 539 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Eri1Q7TMF2 345 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Lamp3Q7TST5 411 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Dupd1Q8BK84 215 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Vmn1r64Q8R2B8 320 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 RnpepQ8VCT3 650 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Hkdc1Q91W97 915 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Ptbp2Q91Z31 531 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Prpf19Q99KP6 504 aaKnown RBP11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Psmd9Q9CR00 222 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Atp13a2Q9CTG6 1169 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Q9D5Y0 588 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Tgm5Q9D7I9 724 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Cyp2c55Q9D816 490 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Dpp7Q9ET22 506 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Col2a1P28481 1487 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Vmn2r65G3X931 845 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Klrk1O54709 232 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Krt4P07744 525 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 MaptP10637 733 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Scg3P47867 471 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 SnnP61807 88 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Clec4fP70194 548 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Rnf113a2Q14B01 337 aa11.61□□□□□ -0.55
Ssh1-201ENSMUST00000077689 Parp8Q3UD82 852 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms