RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	DHPS	P49366	369 aa	Predicted RBP	27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	SPDYC	Q5MJ68	293 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	DPY19L3	Q6ZPD9	716 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	ARMCX6	Q7L4S7	300 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	RAPGEF5	Q92565	580 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	GPR174	Q9BXC1	333 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	LACRT	Q9GZZ8	138 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499	TMEM74B	Q9NUR3	256 aa		27.21	■■□□□ 1.95
VEGFA-231	ENST00000640499		A0A1W2PP55	124 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	C10orf142	B7Z368	130 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	PLK4	O00444	970 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	ALOX15B	O15296	676 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	BUB1	O43683	1085 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	BUB1B	O60566	1050 aa	Predicted RBP	27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	RNASEH1	O60930	286 aa	Known RBP	27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	IL1B	P01584	269 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	USP30	Q70CQ3	517 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	PCDH19	Q8TAB3	1148 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	OR8D1	Q8WZ84	308 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	FAM131C	Q96AQ9	280 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	ISG20	Q96AZ6	181 aa	Known RBP	27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	NEUROG2	Q9H2A3	272 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	GOLPH3	Q9H4A6	298 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	FBXL12	Q9NXK8	326 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	HPCAL4	Q9UM19	191 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	SCML1	Q9UN30	329 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	CFAP54	Q96N23	3096 aa		27.2	■■□□□ 1.94
VEGFA-231	ENST00000640499	RALGAPA1	Q6GYQ0	2036 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499		A0A0A6YYK5	440 aa	Predicted RBP	27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499		A0A0U1RQJ8	604 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	C5AR1	P21730	350 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	COMT	P21964	271 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	CHRNA3	P32297	505 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	CREB5	Q02930	508 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	ZNF33A	Q06730	810 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	KRT81	Q14533	505 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	CYTH1	Q15438	398 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	CARD16	Q5EG05	197 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	PCDH20	Q8N6Y1	951 aa	Known RBP	27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	FAF2	Q96CS3	445 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	SMOC1	Q9H4F8	434 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	DONSON	Q9NYP3	566 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	RCOR3	Q9P2K3	495 aa	Predicted RBP	27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	PCDHGA5	Q9Y5G8	931 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	WASF2	Q9Y6W5	498 aa		27.19	■■□□□ 1.94
VEGFA-231	ENST00000640499	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	C3orf70	A6NLC5	250 aa	Predicted RBP	27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	PRAMEF11	O60813	436 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	KRT7	P08729	469 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	ITPKA	P23677	461 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	NOP2	P46087	812 aa	Known RBP	27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	PLPP6	Q8IY26	295 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	KCTD6	Q8NC69	237 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	PIP4K2C	Q8TBX8	421 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	HINFP	Q9BQA5	517 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	TM6SF2	Q9BZW4	377 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	C6orf106	Q9H6K1	298 aa	Predicted RBP	27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	ALG6	Q9Y672	507 aa		27.18	■■□□□ 1.94
VEGFA-231	ENST00000640499	NDUFS2	O75306	463 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	TMCC1	O94876	653 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	ADH1B	P00325	375 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	MPL	P40238	635 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	SLC1A1	P43005	524 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	PDK2	Q15119	407 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	POM121L1P	Q3SYA9	428 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	TTC31	Q49AM3	519 aa	Predicted RBP	27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	INO80D	Q53TQ3	878 aa	Predicted RBP	27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	ANKRD20A8P	Q5CZ79	823 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	ZNF354C	Q86Y25	554 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	HDDC3	Q8N4P3	179 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	PQLC3	Q8N755	202 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	ARRDC3	Q96B67	414 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	DESI2	Q9BSY9	194 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	GRPEL1	Q9HAV7	217 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	SEMA4G	Q9NTN9	838 aa		27.17	■■□□□ 1.94
VEGFA-231	ENST00000640499	ARHGAP42	A6NI28	874 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	METTL12	A8MUP2	240 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	PJA2	O43164	708 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	KDELR1	P24390	212 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	GK	P32189	559 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	DNA2	P51530	1060 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	CCNH	P51946	323 aa	Predicted RBP	27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	GEMIN4	P57678	1058 aa	Known RBP	27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	ARSI	Q5FYB1	569 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	LRRC38	Q5VT99	294 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	PEAR1	Q5VY43	1037 aa	Predicted RBP	27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	LYSMD4	Q5XG99	296 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	TMCO3	Q6UWJ1	677 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	LZTR1	Q8N653	840 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	TMIE	Q8NEW7	156 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	CADM4	Q8NFZ8	388 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	TPCN2	Q8NHX9	752 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	HSPA12B	Q96MM6	686 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	ZNF670	Q9BS34	389 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	BTBD1	Q9H0C5	482 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	LHX3	Q9UBR4	397 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	PILRB	Q9UKJ0	227 aa		27.16	■■□□□ 1.94
VEGFA-231	ENST00000640499	BTNL10	A8MVZ5	291 aa		27.15	■■□□□ 1.94
VEGFA-231	ENST00000640499	DFFA	O00273	331 aa		27.15	■■□□□ 1.94
VEGFA-231	ENST00000640499	LRP3	O75074	770 aa		27.15	■■□□□ 1.94

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