RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 KIF2CQ99661 725 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 ZSWIM1Q9BR11 485 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 TOR3AQ9H497 397 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 NUP50Q9UKX7 468 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 KBTBD12Q3ZCT8 623 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 DGLUCYQ7Z3D6 616 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF615Q8N8J6 731 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 DNAJA3Q96EY1 480 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 LMLNQ96KR4 655 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 NDNQ99608 321 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 SEMA6BQ9H3T3 888 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 XPNPEP3Q9NQH7 507 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 L1RE1Q9UN81 338 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 GPR75-ASB3A0A0A6YYF3 556 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 OR56A5P0C7T3 313 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 PCDH1Q08174 1060 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 ZBTB45Q96K62 511 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 CEP295NLQ96MC4 621 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 KCNN2Q9H2S1 579 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 TSPAN16Q9UKR8 245 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 RGS20O76081 388 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 RPS12P25398 132 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 CCR1P32246 355 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 PKNOX1P55347 436 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 FNBP1LQ5T0N5 605 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 BTRCQ9Y297 605 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 GLRA3O75311 464 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 IGFALSP35858 605 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 LHX1P48742 406 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 NDUFA5Q16718 116 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 ZBTB49Q6ZSB9 765 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 ADGRA1Q86SQ6 560 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 ARHGEF19Q8IW93 802 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 ISCUQ9H1K1 167 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 TMPRSS4Q9NRS4 437 aa17.2■□□□□ 0.34
CACNA1A-253ENST00000637927 IQCF5A8MTL0 148 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 BMP10O95393 424 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 BTN3A2P78410 334 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 AMZ1Q400G9 498 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 DEFB107AQ8IZN7 70 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 CHST4Q8NCG5 386 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 OR5M3Q8NGP4 307 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 RFX7Q2KHR2 1363 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 SSU72P8A0A1W2PR75 194 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 A8MU76 341 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 LACTBL1A8MY62 500 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 CAPZA1P52907 286 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 GALNT3Q14435 633 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 AGBL2Q5U5Z8 902 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 LRRC70Q7Z2Q7 622 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ERO1BQ86YB8 467 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 BPIFB6Q8NFQ5 453 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 BRSK1Q8TDC3 778 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 FOXP3Q9BZS1 431 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 UBE2OQ9C0C9 1292 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ARMCX1Q9P291 453 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 RPS6KA6Q9UK32 745 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 S100GP29377 79 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 RPA3P35244 121 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 PSMD4P55036 377 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 PREPLQ4J6C6 727 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ATP13A4Q4VNC1 1196 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 TMEM237Q96Q45 408 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 MTG1Q9BT17 334 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 PGM3O95394 542 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 NR0B1P51843 470 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 CDKL1Q00532 357 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 AMPD2Q01433 879 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 TXNRD3Q86VQ6 643 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 LPPQ93052 612 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 PAFAH2Q99487 392 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 CD84Q9UIB8 345 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 MTF2Q9Y483 593 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 MGRN1O60291 552 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 MAFKO60675 156 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ECDO95905 644 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 HPCAL1P37235 193 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 TRAF3Q13114 568 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 PGM5Q15124 567 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ZCWPW2Q504Y3 356 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 SERPINA13PQ6UXR4 307 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 OR2L3Q8NG85 312 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 EEF1AKMT1Q8WVE0 214 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ARHGAP9Q9BRR9 750 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF232Q9UNY5 417 aa17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 USP42Q9H9J4 1324 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-253ENST00000637927 AKAP8O43823 692 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 TSPAN1O60635 241 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 RLN1P04808 185 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 SLC1A6P48664 564 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 ARMC5Q96C12 935 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 IMP3Q9NV31 184 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 CDH9Q9ULB4 789 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
CACNA1A-253ENST00000637927 PDE9AO76083 593 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms