RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ITFG1Q8TB96 612 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 PABPC5Q96DU9 382 aaKnown RBP15.63■□□□□ 0.09
CLN6-219ENST00000637329 ZNF419Q96HQ0 510 aaPredicted RBP15.63■□□□□ 0.09
CLN6-219ENST00000637329 PWWP2AQ96N64 755 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 SMG9Q9H0W8 520 aaKnown RBP15.63■□□□□ 0.09
CLN6-219ENST00000637329 MUC3BQ9H195 1237 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 SLC25A51Q9H1U9 297 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 PPCSQ9HAB8 311 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 ATP13A1Q9HD20 1204 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 VPS45Q9NRW7 570 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 DNAJC17Q9NVM6 304 aaKnown RBP15.63■□□□□ 0.09
CLN6-219ENST00000637329 RBM22Q9NW64 420 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLN6-219ENST00000637329 OBP2AQ9NY56 170 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 GDE1Q9NZC3 331 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 NFS1Q9Y697 457 aa15.63■□□□□ 0.09
CLN6-219ENST00000637329 C2orf16Q68DN1 1984 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 A0A087WUV0 522 aaPredicted RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 AGPSO00116 658 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 PENKP01210 267 aaPredicted RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 IVLP07476 585 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 FSHRP23945 695 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 GEMIN4P57678 1058 aaKnown RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 IFFO1Q0D2I5 559 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 MPP3Q13368 585 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 ZNF235Q14590 738 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 BBS9Q3SYG4 887 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 FYB2Q5VWT5 728 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 RNF219Q5W0B1 726 aaPredicted RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 IL31Q6EBC2 164 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 ARID3BQ8IVW6 561 aaPredicted RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 NPAS3Q8IXF0 933 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 KRT222Q8N1A0 295 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 CARNMT1Q8N4J0 409 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 C12orf76Q8N812 135 aaPredicted RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 OR7D4Q8NG98 312 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 USP33Q8TEY7 942 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 DDI1Q8WTU0 396 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 PYROXD1Q8WU10 500 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 ING5Q8WYH8 240 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 NAT9Q9BTE0 207 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 MLPHQ9BV36 600 aaPredicted RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 POLR1EQ9GZS1 481 aaKnown RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 TRPV4Q9HBA0 871 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 OGFRQ9NZT2 677 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 MARK1Q9P0L2 795 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 UBA2Q9UBT2 640 aaPredicted RBP15.62■□□□□ 0.09
CLN6-219ENST00000637329 SEPT3Q9UH03 358 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 TEX264Q9Y6I9 313 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 MYO9BQ13459 2157 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 SHROOM3Q8TF72 1996 aa15.62■□□□□ 0.09
CLN6-219ENST00000637329 KIF26AQ9ULI4 1882 aaPredicted RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 A0A0D9SEW6 157 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 GOLGA8KD6RF30 607 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 RFXAPO00287 272 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 TCEA3O75764 348 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 ACSL3O95573 720 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 BMP1P13497 986 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 FAM193AP78312 1265 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 ZNF844Q08AG5 666 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 SLC10A7Q0GE19 358 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 STAT4Q14765 748 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 FASTKD3Q14CZ7 662 aaKnown RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 KYNUQ16719 465 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 MSS51Q4VC12 460 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 METTL3Q86U44 580 aaKnown RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 CCNJLQ8IV13 435 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 FBXO36Q8NEA4 188 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 OR52K2Q8NGK3 314 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 FIBINQ8TAL6 211 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 RIN3Q8TB24 985 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 IMP4Q96G21 291 aaKnown RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 C9orf72Q96LT7 481 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 ZSWIM3Q96MP5 696 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 WDR83Q9BRX9 315 aaKnown RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 C2orf49Q9BVC5 232 aaPredicted RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 ROPN1BQ9BZX4 212 aaPredicted RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 IGFLR1Q9H665 355 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 ROPN1Q9HAT0 212 aaPredicted RBP15.61■□□□□ 0.09
CLN6-219ENST00000637329 OR51B4Q9Y5P0 310 aa15.61■□□□□ 0.09
CLN6-219ENST00000637329 SCAMP3O14828 347 aaKnown RBP15.6■□□□□ 0.09
CLN6-219ENST00000637329 CPP00450 1065 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 MYZAPP0CAP1 466 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 CES1P23141 567 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 CDH17Q12864 832 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 SKIV2LQ15477 1246 aaKnown RBP15.6■□□□□ 0.09
CLN6-219ENST00000637329 INO80DQ53TQ3 878 aaPredicted RBP15.6■□□□□ 0.09
CLN6-219ENST00000637329 CEP85LQ5SZL2 805 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 RIBC1Q8N443 379 aaPredicted RBP15.6■□□□□ 0.09
CLN6-219ENST00000637329 TTC16Q8NEE8 873 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 SMARCD2Q92925 531 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 ACDQ96AP0 544 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 TADA1Q96BN2 335 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 OXNAD1Q96HP4 312 aaPredicted RBP15.6■□□□□ 0.09
CLN6-219ENST00000637329 ASB16Q96NS5 453 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 NECAB3Q96P71 396 aaPredicted RBP15.6■□□□□ 0.09
CLN6-219ENST00000637329 PSKH2Q96QS6 385 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 MGME1Q9BQP7 344 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 CCDC77Q9BR77 488 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 FEM1AQ9BSK4 669 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 NT5MQ9NPB1 228 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms