RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 IRF1P10914 325 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 ADRA1AP35348 466 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 CRADDP78560 199 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
TP53-228ENST00000635293 SLC14A2Q15849 920 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 RFWD3Q6PCD5 774 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 TRMT10BQ6PF06 316 aaKnown RBP11.84□□□□□ -0.51
TP53-228ENST00000635293 CPLX4Q7Z7G2 160 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 ZNF354CQ86Y25 554 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 FAM217AQ8IXS0 508 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 BBS5Q8N3I7 341 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
TP53-228ENST00000635293 HJURPQ8NCD3 748 aaPredicted RBP11.84□□□□□ -0.51
TP53-228ENST00000635293 DYDC1Q8WWB3 177 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 PABPC5Q96DU9 382 aaKnown RBP11.84□□□□□ -0.51
TP53-228ENST00000635293 MYEOVQ96EZ4 313 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 CHMP6Q96FZ7 201 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 CERS2Q96G23 380 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 SEC16BQ96JE7 1060 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 FICDQ9BVA6 458 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 FSD1LQ9BXM9 530 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 LRRC3Q9BY71 257 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 PDFQ9HBH1 243 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 MRM3Q9HC36 420 aaKnown RBP11.84□□□□□ -0.51
TP53-228ENST00000635293 TRPC7Q9HCX4 862 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 NT5MQ9NPB1 228 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 TLR9Q9NR96 1032 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 SMYD2Q9NRG4 433 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 LSM7Q9UK45 103 aaKnown RBP11.84□□□□□ -0.51
TP53-228ENST00000635293 RPS6KL1Q9Y6S9 549 aa11.84□□□□□ -0.51
TP53-228ENST00000635293 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 TYW5A2RUC4 315 aaKnown RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 CXorf49A8MYA2 514 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 J3KR12 359 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 TM9SF1O15321 606 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 TYROBPO43914 113 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 MT-ND3P03897 115 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 RHOCP08134 193 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 DRD4P21917 467 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 HOXD9P28356 352 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 GABRR2P28476 465 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 SLC7A9P82251 487 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 PPARDQ03181 441 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 DNAJC3Q13217 504 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ZNF177Q13360 481 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 LBRQ14739 615 aaKnown RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 ALG1LQ6GMV1 187 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 KDELC1Q6UW63 502 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 Q6ZNB5 142 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 MICALL1Q8N3F8 863 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ANKRD42Q8N9B4 389 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 IPMKQ8NFU5 416 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 SPATA22Q8NHS9 363 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ZNF669Q96BR6 464 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 HTATIP2Q9BUP3 242 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 KIFC1Q9BW19 673 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 NSRP1Q9H0G5 558 aaKnown RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 GKN1Q9NS71 199 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ZNF510Q9Y2H8 683 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 TBC1D30Q9Y2I9 924 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 TRAV19A0A0A6YYK7 116 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 LCHNA4D1U4 455 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 LINC01553A4QN01 128 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 FOXO6A8MYZ6 492 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 TRIM49D1C9J1S8 452 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 MT-CYBP00156 380 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 RB1P06400 928 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 SPATA31D3P0C874 917 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 KRT4P19013 534 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 HDCP19113 662 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 CA4P22748 312 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ACVRL1P37023 503 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 CCNFP41002 786 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 LIG3P49916 1009 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 RPS24P62847 133 aaKnown RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 IL9RQ01113 521 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 SLC18A2Q05940 514 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 SLC10A7Q0GE19 358 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 IFT88Q13099 833 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ZNF235Q14590 738 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 RFTN1Q14699 578 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 QPCTQ16769 361 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 PCID2Q5JVF3 399 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 PPM1LQ5SGD2 360 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 PLPP4Q5VZY2 271 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 SPATA31D4Q6ZUB0 917 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 GAREM2Q75VX8 874 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 C4orf33Q8N1A6 199 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 CFAP52Q8N1V2 620 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ARL14EPQ8N8R7 260 aaPredicted RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 MRPL43Q8N983 215 aaKnown RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 PPHLN1Q8NEY8 458 aaKnown RBP11.83□□□□□ -0.52
TP53-228ENST00000635293 SPPL3Q8TCT6 385 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 CKAP2Q8WWK9 683 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 TADA1Q96BN2 335 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 CABS1Q96KC9 395 aa11.83□□□□□ -0.52
TP53-228ENST00000635293 ZNF317Q96PQ6 595 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms