RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-219	ENST00000629151	CYP1B1	Q16678	543 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	ACCSL	Q4AC99	568 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	TEX44	Q53QW1	395 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	C2orf27A	Q580R0	203 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	NAIF1	Q69YI7	327 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	NPNT	Q6UXI9	565 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	SYT13	Q7L8C5	426 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	DSG4	Q86SJ6	1040 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	ZC3H18	Q86VM9	953 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	SPEM1	Q8N4L4	309 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	IL17RC	Q8NAC3	791 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	MNS1	Q8NEH6	495 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	ATL2	Q8NHH9	583 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	CYB5D2	Q8WUJ1	264 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	EZH1	Q92800	747 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	GDAP1L1	Q96MZ0	367 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	LGMN	Q99538	433 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	HERPUD2	Q9BSE4	406 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	CINP	Q9BW66	212 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	SLCO3A1	Q9UIG8	710 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	ZNF148	Q9UQR1	794 aa		11.75	□□□□□ -0.53
PTPN7-219	ENST00000629151	TCRBV7S2A1N4T	A0A589	114 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	ZNF185	O15231	689 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	RNASEH1	O60930	286 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	TMCC1	O94876	653 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	POP4	O95707	220 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	CD160	O95971	181 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	IGSF6	O95976	241 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	PEX11B	O96011	259 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	GLDC	P23378	1020 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	CHRNA3	P32297	505 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	CTSO	P43234	321 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	FNTA	P49354	379 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	DGKE	P52429	567 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	RHOA	P61586	193 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	CCDC15	Q0P6D6	951 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	FZD5	Q13467	585 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	CAMK2G	Q13555	558 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	ELAVL3	Q14576	367 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	SIX1	Q15475	284 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	CARD16	Q5EG05	197 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	EMC10	Q5UCC4	262 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	EGFLAM	Q63HQ2	1017 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	ITPRIPL1	Q6GPH6	555 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	LINGO4	Q6UY18	593 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	CCDC105	Q8IYK2	499 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	C12orf50	Q8NA57	414 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	TXNDC5	Q8NBS9	432 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	FLCN	Q8NFG4	579 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	OR2AP1	Q8NGE2	309 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	GRK7	Q8WTQ7	553 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	SORCS1	Q8WY21	1168 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	MAGOHB	Q96A72	148 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	PBXIP1	Q96AQ6	731 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	MYO19	Q96H55	970 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	MS4A14	Q96JA4	679 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	RPL10L	Q96L21	214 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	IL12RB2	Q99665	862 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	FOXQ1	Q9C009	403 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	POLR1E	Q9GZS1	481 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	POLM	Q9NP87	494 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	MMP17	Q9ULZ9	603 aa		11.74	□□□□□ -0.53
PTPN7-219	ENST00000629151	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151		A0A1W2PQ67	120 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	C5orf60	A6NFR6	353 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	FANCG	O15287	622 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	OPHN1	O60890	802 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	PHF2	O75151	1096 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	ALDH1A2	O94788	518 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	KLF8	O95600	359 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	GAS8	O95995	478 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	MT-CO1	P00395	513 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	JCHAIN	P01591	159 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	EPHX1	P07099	455 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	C7	P10643	843 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	CHRM1	P11229	460 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	HOXB2	P14652	356 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	IL12RB1	P42701	662 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	CCR3	P51677	355 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	NUBP1	P53384	320 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	SEC13	P55735	322 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	AP1S1	P61966	158 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	ZBTB16	Q05516	673 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	SLC10A7	Q0GE19	358 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	CYTH1	Q15438	398 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	OASL	Q15646	514 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	SLC14A2	Q15849	920 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	P3H1	Q32P28	736 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	FAM46C	Q5VWP2	391 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	C22orf39	Q6P5X5	142 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	ARHGAP36	Q6ZRI8	547 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	ADAT2	Q7Z6V5	191 aa	Known RBP	11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	TP53INP2	Q8IXH6	220 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	CAMKK1	Q8N5S9	505 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	ALLC	Q8N6M5	410 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	PRELID2	Q8N945	189 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	RPLP0P6	Q8NHW5	317 aa		11.73	□□□□□ -0.53
PTPN7-219	ENST00000629151	CCHCR1	Q8TD31	782 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms