RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CDC25BP30305 580 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 HCAR3P49019 387 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 CLCN6P51797 869 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 ST8SIA6P61647 398 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 RPL6Q02878 288 aaKnown RBP11.34□□□□□ -0.59
DDX41-219ENST00000629036 SERINC3Q13530 473 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 SF3A2Q15428 464 aaKnown RBP11.34□□□□□ -0.59
DDX41-219ENST00000629036 KCNT1Q5JUK3 1230 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 SLC36A4Q6YBV0 504 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 RFX8Q6ZV50 586 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 USP30Q70CQ3 517 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 H2AFVQ71UI9 128 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 LPCAT2Q7L5N7 544 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 POLNQ7Z5Q5 900 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 MMAAQ8IVH4 418 aaKnown RBP11.34□□□□□ -0.59
DDX41-219ENST00000629036 CHST14Q8NCH0 376 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 DNASE2BQ8WZ79 361 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 PANX2Q96RD6 677 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 PCDH18Q9HCL0 1135 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 ETNK2Q9NVF9 386 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 IP6K2Q9UHH9 426 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 SLC25A13Q9UJS0 675 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 PPM1HQ9ULR3 514 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 WASF2Q9Y6W5 498 aa11.34□□□□□ -0.59
DDX41-219ENST00000629036 ATXN2Q99700 1313 aaKnown RBP11.34□□□□□ -0.59
DDX41-219ENST00000629036 LRP4O75096 1905 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 LNP1A1A4G5 178 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 RCCD1A6NED2 376 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 RASA4BC9J798 803 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 CBX4O00257 560 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 PLK4O00444 970 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 MCF2LO15068 1137 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 RASA4O43374 803 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 KDELR3O43731 214 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 AKR1B10O60218 316 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 RNF8O76064 485 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 IGHV4-34P06331 123 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 CD48P09326 243 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 ERCC2P18074 760 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 MAN1A1P33908 653 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 PSMD8P48556 350 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 HADHBP55084 474 aaKnown RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 YBEYP58557 167 aaPredicted RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 TAS2R38P59533 333 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 TPI1P60174 286 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 KRT83P78385 493 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 SHC2P98077 582 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 AASDHQ4L235 1098 aaPredicted RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 ATP13A4Q4VNC1 1196 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 AGBL4Q5VU57 503 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 LYSMD4Q5XG99 296 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 NETO2Q8NC67 525 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 CADM4Q8NFZ8 388 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 CTNNBL1Q8WYA6 563 aaPredicted RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 ISG20Q96AZ6 181 aaKnown RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 CCDC42Q96M95 316 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 HSPA12BQ96MM6 686 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 CSPG4P5Q96PW8 444 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 GPR174Q9BXC1 333 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 CEP44Q9C0F1 390 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 C6orf106Q9H6K1 298 aaPredicted RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX41-219ENST00000629036 ZNHIT6Q9NWK9 470 aaKnown RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 TFR2Q9UP52 801 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
DDX41-219ENST00000629036 BPTFQ12830 3046 aa11.33□□□□□ -0.6
DDX41-219ENST00000629036 A0A1W2PP55 124 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SOWAHDA6NJG2 315 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
DDX41-219ENST00000629036 SPINT1O43278 529 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 PEX11BO96011 259 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 ADH1BP00325 375 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 TPM1P09493 284 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 OXTRP30559 389 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SLC8A1P32418 973 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 ETFBP38117 255 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 DHPSP49366 369 aaPredicted RBP11.32□□□□□ -0.6
DDX41-219ENST00000629036 ZNF135P52742 658 aaPredicted RBP11.32□□□□□ -0.6
DDX41-219ENST00000629036 NDST2P52849 883 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 ADPRHP54922 357 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 CREB5Q02930 508 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 ZNF33AQ06730 810 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
DDX41-219ENST00000629036 PARP15Q460N3 678 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 PIP5KL1Q5T9C9 394 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 UNQ6494/PRO21346Q6UXR6 183 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 RAD9BQ6WBX8 426 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 LEKR1Q6ZMV7 388 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 DPY19L3Q6ZPD9 716 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 ARHGAP36Q6ZRI8 547 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 CYP2U1Q7Z449 544 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 FAM124AQ86V42 546 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 SYT12Q8IV01 421 aa11.32□□□□□ -0.6
DDX41-219ENST00000629036 PLPP6Q8IY26 295 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms