RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 ATP11AP98196 1134 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 MTA1Q13330 715 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 ZNF284Q2VY69 593 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 ARSIQ5FYB1 569 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 FAM46CQ5VWP2 391 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 SEL1L3Q68CR1 1132 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 KDM7AQ6ZMT4 941 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 ARCQ7LC44 396 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 APTXQ7Z2E3 356 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 NLRP14Q86W24 1093 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 SLC22A18ASQ8N1D0 253 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 SLC25A45Q8N413 288 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 TMIEQ8NEW7 156 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 ENOX1Q8TC92 643 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 CNDP2Q96KP4 475 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 HAPLN3Q96S86 360 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 C2orf49Q9BVC5 232 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 PDCL3Q9H2J4 239 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 ERVMER34-1Q9H9K5 563 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 NLRC4Q9NPP4 1024 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 DKK4Q9UBT3 224 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 LHX6Q9UPM6 363 aa13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 TDRD6O60522 2096 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-241ENST00000626948 URB1O60287 2271 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 TRPM6Q9BX84 2022 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 A0A1W2PQU0 124 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 TCRBV5S1A1TA0A578 114 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 ILVBLA1L0T0 632 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 C2CD4BA6NLJ0 364 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 C1QTNF3-AMACRE9PGA6 284 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 KPNA3O00505 521 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 PES1O00541 588 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 TRIM38O00635 465 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 SLC31A1O15431 190 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 SPINT1O43278 529 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 ITGAVP06756 1048 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 OR1E1P30953 314 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 GKP32189 559 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 HDAC4P56524 1084 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 CLDN2P57739 230 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 SNX16P57768 344 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 POLR2FP61218 127 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 KRT83P78385 493 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 CDR2Q01850 454 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 CYP4F3Q08477 520 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 TMEM259Q4ZIN3 620 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 GCNT7Q6ZNI0 430 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 DSG4Q86SJ6 1040 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 IQCHQ86VS3 1027 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 GRIN3AQ8TCU5 1115 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 RXFP2Q8WXD0 754 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 CENPIQ92674 756 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 CRELD1Q96HD1 420 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 C11orf70Q9BRQ4 267 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 PREBQ9HCU5 417 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 FANCLQ9NW38 375 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 UCKL1Q9NWZ5 548 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 DMTF1Q9Y222 760 aa13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 FCF1Q9Y324 198 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-241ENST00000626948 COL27A1Q8IZC6 1860 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 RAD51BO15315 384 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 LEFTY1O75610 366 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 LDOC1O95751 146 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 ADRA1BP35368 520 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 SOX5P35711 763 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 SERPINH1P50454 418 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 GNA12Q03113 381 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 CDO1Q16878 200 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 COL28A1Q2UY09 1125 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 PROX2Q3B8N5 592 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 CT47A1Q5JQC4 288 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 TPRG1LQ5T0D9 272 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 FBXL19Q6PCT2 694 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 DRC7Q8IY82 874 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 CCDC185Q8N715 623 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 OR13H1Q8NG92 308 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 BMFQ96LC9 184 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 PPP1R9BQ96SB3 815 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 ZYG11BQ9C0D3 744 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 NOL6Q9H6R4 1146 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 GPR27Q9NS67 375 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 PPARGC1AQ9UBK2 798 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 IL36AQ9UHA7 158 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 GGT7Q9UJ14 662 aa13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 TPX2Q9ULW0 747 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-241ENST00000626948 ATRXP46100 2492 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 PRAMEF26H0Y7S4 382 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 THEGLP0DJG4 465 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 RFC1P35251 1148 aaPredicted RBP13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 CLCN6P51797 869 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 NRG1Q02297 640 aaPredicted RBP13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 NCAPHQ15003 741 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 SETMARQ53H47 684 aaPredicted RBP13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 C6orf118Q5T5N4 469 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 LRRC31Q6UY01 552 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 LEKR1Q6ZMV7 388 aa13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 ERN2Q76MJ5 926 aaKnown RBP13.8□□□□□ -0.2
SOX2-OT-241ENST00000626948 PARS2Q7L3T8 475 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms