RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 NETO1Q8TDF5 533 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 TEKT4Q8WW24 435 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 CASKIN2Q8WXE0 1202 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 NUSAP1Q9BXS6 441 aaKnown RBP17.08■□□□□ 0.32
UBE3D-208ENST00000626828 ZWILCHQ9H900 591 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 SPTLC3Q9NUV7 552 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 CWC15Q9P013 229 aaKnown RBP17.08■□□□□ 0.32
UBE3D-208ENST00000626828 INTUQ9ULD6 942 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 SLC6A14Q9UN76 642 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 CNOT1A5YKK6 2376 aaKnown RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 LRRC72A6NJI9 287 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 H3BRJ5 948 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 BUB1O43683 1085 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 ZNF821O75541 412 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 PROSCO94903 275 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 CD160O95971 181 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 PRNPP04156 253 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 SERPINF2P08697 491 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 MAOBP27338 520 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 ARL4AP40617 200 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 SSR1P43307 286 aaKnown RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 DNA2P51530 1060 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 SERINC3Q13530 473 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 DPYSL2Q16555 572 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 RSPO4Q2I0M5 234 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 INO80DQ53TQ3 878 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 TRIM61Q5EBN2 209 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 KCNT1Q5JUK3 1230 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 DAB2IPQ5VWQ8 1189 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 DPY19L3Q6ZPD9 716 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 CCDC170Q8IYT3 715 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 AADATQ8N5Z0 425 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 LZTR1Q8N653 840 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 SLC35G2Q8TBE7 412 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 TNKS2Q9H2K2 1166 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 C6orf106Q9H6K1 298 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 SARDHQ9UL12 918 aa17.07■□□□□ 0.32
UBE3D-208ENST00000626828 TNRC6BQ9UPQ9 1833 aaKnown RBP17.07■□□□□ 0.32
UBE3D-208ENST00000626828 ARHGAP42A6NI28 874 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 PATE3B3GLJ2 98 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 SLC7A4O43246 635 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 GDF9O60383 454 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 TCF4P15884 667 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 ARHGAP25P42331 645 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 LIMK1P53667 647 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 PUM1Q14671 1186 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBE3D-208ENST00000626828 TCEAL6Q6IPX3 200 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 POLNQ7Z5Q5 900 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 RHOT2Q8IXI1 618 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 OR2T34Q8NGX1 318 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 OR14C36Q8NHC7 312 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 HSPH1Q92598 858 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 TCEAL3Q969E4 200 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 HMCESQ96FZ2 354 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 PANX2Q96RD6 677 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 HEPHQ9BQS7 1158 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 KDM4CQ9H3R0 1056 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 LRRC19Q9H756 370 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 DLL3Q9NYJ7 618 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 SERGEFQ9UGK8 458 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 IL36AQ9UHA7 158 aa17.06■□□□□ 0.32
UBE3D-208ENST00000626828 EIF2B4Q9UI10 523 aaKnown RBP17.06■□□□□ 0.32
UBE3D-208ENST00000626828 CDV3Q9UKY7 258 aaKnown RBP17.06■□□□□ 0.32
UBE3D-208ENST00000626828 TPX2Q9ULW0 747 aaKnown RBP17.06■□□□□ 0.32
UBE3D-208ENST00000626828 FCF1Q9Y324 198 aaKnown RBP17.06■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3DA0A087WVF3 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3IA0A087WXS9 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3EA0A087X179 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3KA0A087X1G2 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 A0A1B0GTW7 788 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3FA6NER0 549 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-208ENST00000626828 FAM47DPA6NHR8 397 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3LB9A6J9 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 FSBPO95073 299 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 POP4O95707 220 aaKnown RBP17.05■□□□□ 0.32
UBE3D-208ENST00000626828 CFIP05156 583 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3HP0C7X1 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 DRD3P35462 400 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 MAGEA1P43355 309 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 SNRPD1P62314 119 aaKnown RBP17.05■□□□□ 0.32
UBE3D-208ENST00000626828 SLC25A11Q02978 314 aaKnown RBP17.05■□□□□ 0.32
UBE3D-208ENST00000626828 SMTNL2Q2TAL5 461 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 ARSIQ5FYB1 569 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 KIAA0895LQ68EN5 471 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3GQ6DHY5 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3CQ6IPX1 549 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 TBC1D3Q8IZP1 549 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-208ENST00000626828 CHST14Q8NCH0 376 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 FAM131CQ96AQ9 280 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 BIRC7Q96CA5 298 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 RMDN1Q96DB5 314 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 LRIG1Q96JA1 1093 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 RTKNQ9BST9 563 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 SLC39A8Q9C0K1 460 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 KLC2Q9H0B6 622 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 MIR1-1HGQ9H1L0 117 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 OSGEPQ9NPF4 335 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms