RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 MFHAS1Q9Y4C4 1052 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 WASF2Q9Y6W5 498 aa8.42□□□□□ -1.06
NEK3-209ENST00000618856 C3orf70A6NLC5 250 aaPredicted RBP8.41□□□□□ -1.06
NEK3-209ENST00000618856 BTNL10A8MVZ5 291 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 MAP3K13O43283 966 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 PRAMEF11O60813 436 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 RNASEH1O60930 286 aaKnown RBP8.41□□□□□ -1.06
NEK3-209ENST00000618856 NDUFA10O95299 355 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 PEX11BO96011 259 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 GSRP00390 522 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 IGHV4-34P06331 123 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 CD48P09326 243 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 ACADMP11310 421 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 CHRNA3P32297 505 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 MAGEA1P43355 309 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 NUMBP49757 651 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 METAP1P53582 386 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 LIMK1P53667 647 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 SFSWAPQ12872 951 aaKnown RBP8.41□□□□□ -1.06
NEK3-209ENST00000618856 DPYSL3Q14195 570 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 CYTH1Q15438 398 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 TAZQ16635 292 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 SMTNL2Q2TAL5 461 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 TTC31Q49AM3 519 aaPredicted RBP8.41□□□□□ -1.06
NEK3-209ENST00000618856 ATP13A4Q4VNC1 1196 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 CARD16Q5EG05 197 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 AGBL4Q5VU57 503 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 FAM46CQ5VWP2 391 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 LYSMD4Q5XG99 296 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 IL31Q6EBC2 164 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 RAD9BQ6WBX8 426 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 DPY19L3Q6ZPD9 716 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 PRR23CQ6ZRP0 262 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 DSG4Q86SJ6 1040 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 SYT12Q8IV01 421 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 MMAAQ8IVH4 418 aaKnown RBP8.41□□□□□ -1.06
NEK3-209ENST00000618856 CHST14Q8NCH0 376 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 OR8D1Q8WZ84 308 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 FATE1Q969F0 183 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 HMCESQ96FZ2 354 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 LRIG1Q96JA1 1093 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 ZNF670Q9BS34 389 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 HDAC8Q9BY41 377 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 SLC39A8Q9C0K1 460 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 NEUROG2Q9H2A3 272 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 KDM4CQ9H3R0 1056 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 ZWILCHQ9H900 591 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 ETNK2Q9NVF9 386 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 FBXL12Q9NXK8 326 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.41□□□□□ -1.06
NEK3-209ENST00000618856 PCDHA13Q9Y5I0 950 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 ACTL7AQ9Y615 435 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 EPN1Q9Y6I3 576 aaPredicted RBP8.41□□□□□ -1.06
NEK3-209ENST00000618856 NUP205Q92621 2012 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 THADAQ6YHU6 1953 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 PCDH15Q96QU1 1955 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 CEP192Q8TEP8 1941 aa8.41□□□□□ -1.06
NEK3-209ENST00000618856 A0A1W2PP55 124 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PRR5-ARHGAP8B1AHC4 643 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 H3BRJ5 948 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 J3KR12 359 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PJA2O43164 708 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 LATO43561 262 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PLRG1O43660 514 aaKnown RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 SEMA4FO95754 770 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 IL1BP01584 269 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PRNPP04156 253 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 KRT7P08729 469 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 ITPKAP23677 461 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 CYLC1P35663 651 aaPredicted RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 SLC1A1P43005 524 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 CSNK1DP48730 415 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PAPOLAP51003 745 aaKnown RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 CCR5P51681 352 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 ADPRHP54922 357 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 TAS2R38P59533 333 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 ARHGAP8P85298 464 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 CREB5Q02930 508 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 LMNB2Q03252 620 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 IL10RBQ08334 325 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PAFAH1B3Q15102 231 aaKnown RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 PDK2Q15119 407 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 HADHQ16836 314 aaKnown RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 ACCSLQ4AC99 568 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PPP6R3Q5H9R7 873 aaPredicted RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 PIP5KL1Q5T9C9 394 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 CYP2U1Q7Z449 544 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 TP53INP2Q8IXH6 220 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PQLC3Q8N755 202 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 OR2AP1Q8NGE2 309 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PCDH19Q8TAB3 1148 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 CEP76Q8TAP6 659 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 PIP4K2CQ8TBX8 421 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 SPOCK2Q92563 424 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 CALR3Q96L12 384 aaKnown RBP8.4□□□□□ -1.06
NEK3-209ENST00000618856 CCDC114Q96M63 670 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 HSPA12BQ96MM6 686 aa8.4□□□□□ -1.06
NEK3-209ENST00000618856 GPR174Q9BXC1 333 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms