RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TBC1D23Q9NUY8 699 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 TBC1D13Q9NVG8 400 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 SMG5Q9UPR3 1016 aaKnown RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 PRELID1Q9Y255 219 aa16.26■□□□□ 0.19
RTN1-209ENST00000611068 MRPL42Q9Y6G3 142 aaKnown RBP16.26■□□□□ 0.19
RTN1-209ENST00000611068 hCG_1818297A0A087WSY0 165 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 A0A088AWK7 358 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 NRP1O14786 923 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 IFNB1P01574 187 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 DLDP09622 509 aaKnown RBP16.25■□□□□ 0.19
RTN1-209ENST00000611068 PHBP35232 272 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
RTN1-209ENST00000611068 TKTL1P51854 596 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 MTM1Q13496 603 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 CCNIQ14094 377 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 NOMO2Q5JPE7 1267 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 SDHAF4Q5VUM1 108 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 FAAH2Q6GMR7 532 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 AAGABQ6PD74 315 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 BTBD9Q96Q07 612 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 LRRC19Q9H756 370 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 LRRC4Q9HBW1 653 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 FAM237BA0A1B0GVD1 139 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 CAPN14A8MX76 684 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 ENPP3O14638 875 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 ITIH2P19823 946 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 RPL9P32969 192 aaKnown RBP16.25■□□□□ 0.19
RTN1-209ENST00000611068 NR1H2P55055 460 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 ARPP19P56211 112 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 XIAPP98170 497 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 NME3Q13232 169 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 ARL13BQ3SXY8 428 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 NANOGP8Q6NSW7 305 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 FAM35AQ86V20 835 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 FAM131BQ86XD5 332 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 DEFB106AQ8N104 65 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 SIX5Q8N196 739 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 PYROXD2Q8N2H3 581 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 EDEM1Q92611 657 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 MYLPFQ96A32 169 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 NACC2Q96BF6 587 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 SNF8Q96H20 258 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 PGLYRP2Q96PD5 576 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 ZNF696Q9H7X3 374 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 NRDE2Q9H7Z3 1164 aa16.25■□□□□ 0.19
RTN1-209ENST00000611068 PAK6Q9NQU5 681 aaPredicted RBP16.25■□□□□ 0.19
RTN1-209ENST00000611068 MTO1Q9Y2Z2 717 aaKnown RBP16.25■□□□□ 0.19
RTN1-209ENST00000611068 CCDC162PA2VCL2 907 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ARHGAP42A6NI28 874 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 DENRO43583 198 aaKnown RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 CNOT3O75175 753 aaKnown RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 ZBTB11O95625 1053 aaPredicted RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 SRGAP2BP0DMP2 458 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ODC1P11926 461 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 RAG1P15918 1043 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ADCY8P40145 1251 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 LHX1P48742 406 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 LRP8Q14114 963 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 TRIM60Q495X7 471 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 OVOS1Q6IE37 1185 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 FAM117BQ6P1L5 589 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 CYP4V2Q6ZWL3 525 aaPredicted RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 LPCAT2Q7L5N7 544 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 SIX6OS1Q8N1H7 587 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 BIRC8Q96P09 236 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 FAM193BQ96PV7 902 aaPredicted RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 TBCBQ99426 244 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ULBP1Q9BZM6 244 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 PLK2Q9NYY3 685 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ANAPC5Q9UJX4 755 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 CARD8Q9Y2G2 431 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 DTNAQ9Y4J8 743 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 TDRD15B5MCY1 1934 aaKnown RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 TNFAIP8O95379 198 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 RPLP2P05387 115 aaKnown RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 PPARGP37231 505 aaPredicted RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 CDK9P50750 372 aaKnown RBP16.24■□□□□ 0.19
RTN1-209ENST00000611068 PDK1Q15118 436 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 CLUL1Q15846 466 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 EFHC1Q5JVL4 640 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 DCLRE1AQ6PJP8 1040 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ABI1Q8IZP0 508 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ZMIZ2Q8NF64 920 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 FNIP1Q8TF40 1166 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 DCUN1D5Q9BTE7 237 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 TSSK1BQ9BXA7 367 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 THEGQ9P2T0 379 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 ATP11BQ9Y2G3 1177 aa16.24■□□□□ 0.19
RTN1-209ENST00000611068 XPO1O14980 1071 aaKnown RBP16.23■□□□□ 0.19
RTN1-209ENST00000611068 CRTAMO95727 393 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 KRT7P08729 469 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 KRT4P19013 534 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SLC18A1P54219 525 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 TLE2Q04725 743 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SF3B4Q15427 424 aaKnown RBP eCLIP16.23■□□□□ 0.19
RTN1-209ENST00000611068 METTL23Q86XA0 190 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 CCDC185Q8N715 623 aa16.23■□□□□ 0.19
RTN1-209ENST00000611068 SCAMP5Q8TAC9 235 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms