RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SPON2Q9BUD6 331 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 LMAN2LQ9H0V9 348 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 TBK1Q9UHD2 729 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 MSRAQ9UJ68 235 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 DENND4CQ5VZ89 1909 aa21.96■■□□□ 1.11
USP6NL-204ENST00000606752 CCDC195A0A1B0GUA6 201 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 NPY2RP49146 381 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 CRADDP78560 199 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 SKOR1P84550 965 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 CDH17Q12864 832 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 ZNF697Q5TEC3 545 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 STEAP4Q687X5 459 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 CYS1Q717R9 158 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 ADGRD2Q7Z7M1 963 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 CYP4X1Q8N118 509 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 GSDMBQ8TAX9 411 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 IMP4Q96G21 291 aaKnown RBP21.95■■□□□ 1.1
USP6NL-204ENST00000606752 ACE2Q9BYF1 805 aaPredicted RBP21.95■■□□□ 1.1
USP6NL-204ENST00000606752 NKX2-4Q9H2Z4 354 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 TLE6Q9H808 572 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 SYBUQ9NX95 663 aa21.95■■□□□ 1.1
USP6NL-204ENST00000606752 H0Y626 953 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PGAM1P18669 254 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 OXCT1P55809 520 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PPP2R2AP63151 447 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 ITKQ08881 620 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 MPP3Q13368 585 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 RAB30Q15771 203 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 SLC5A9Q2M3M2 681 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 KBTBD12Q3ZCT8 623 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PRSS36Q5K4E3 855 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 BBS7Q8IWZ6 715 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 SH3RF2Q8TEC5 729 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 ZNF707Q96C28 371 aaPredicted RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 GDF15Q99988 308 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 TBL1YQ9BQ87 522 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 APOL2Q9BQE5 337 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 DHRS4Q9BTZ2 278 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 SMG9Q9H0W8 520 aaKnown RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PSMC3IPQ9P2W1 217 aaPredicted RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 E2F8A0AVK6 867 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 ZNF197O14709 1029 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 LUC7L3O95232 432 aaKnown RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PRKCHP24723 683 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 MSH2P43246 934 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 ATP1A2P50993 1020 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 NTHL1P78549 312 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 EFTUD2Q15029 972 aaKnown RBP eCLIP21.94■■□□□ 1.13e-8■■■■■ 29.7
USP6NL-204ENST00000606752 RNF219Q5W0B1 726 aaPredicted RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PPP2R2DQ66LE6 453 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 LEKR1Q6ZMV7 388 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 TAOK1Q7L7X3 1001 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 GRASPQ7Z6J2 395 aaPredicted RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PRPF39Q86UA1 669 aaKnown RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 EXOC3L1Q86VI1 746 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 CARNMT1Q8N4J0 409 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 TDRD5Q8NAT2 981 aaKnown RBP21.94■■□□□ 1.1
USP6NL-204ENST00000606752 IPMKQ8NFU5 416 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 PAFAH2Q99487 392 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 ATP13A1Q9HD20 1204 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 VPS45Q9NRW7 570 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 SAMD15Q9P1V8 674 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 ZMYM5Q9UJ78 669 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 CHD9Q3L8U1 2897 aa21.94■■□□□ 1.1
USP6NL-204ENST00000606752 MAGEB16A2A368 324 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 C1QAP02745 245 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 ADRA1AP35348 466 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 MAXP61244 160 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 MPP7Q5T2T1 576 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 ADGRD1Q6QNK2 874 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 MRRFQ96E11 262 aaKnown RBP21.93■■□□□ 1.1
USP6NL-204ENST00000606752 TRIM56Q9BRZ2 755 aaKnown RBP21.93■■□□□ 1.1
USP6NL-204ENST00000606752 IL22Q9GZX6 179 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 MUC3BQ9H195 1237 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 HAUS2Q9NVX0 235 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 GBF1Q92538 1859 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 CEP290O15078 2479 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 DOCK6Q96HP0 2047 aa21.93■■□□□ 1.1
USP6NL-204ENST00000606752 PMPCBO75439 489 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 PIAS1O75925 651 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 NIPAL4Q0D2K0 466 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 NR1H3Q13133 447 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 ZNF235Q14590 738 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 TMED2Q15363 201 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 TERF2Q15554 542 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 DUSP6Q16828 381 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 MPPE1Q53F39 396 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 FSCBQ5H9T9 825 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 BBS5Q8N3I7 341 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 PGBD5Q8N414 524 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 DDI1Q8WTU0 396 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 MRGPRX2Q96LB1 330 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 FICDQ9BVA6 458 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 TDP1Q9NUW8 608 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 MOCS1Q9NZB8 636 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 UBA2Q9UBT2 640 aaPredicted RBP21.92■■□□□ 1.1
USP6NL-204ENST00000606752 CCL26Q9Y258 94 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 CHD5Q8TDI0 1954 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 ALDH1A2O94788 518 aa21.92■■□□□ 1.1
USP6NL-204ENST00000606752 POLBP06746 335 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms