RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SPANXN3Q5MJ09 141 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 POTEHQ6S545 545 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DCAF4L2Q8NA75 395 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TDRD5Q8NAT2 981 aaKnown RBP12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 EPS8L3Q8TE67 593 aaKnown RBP12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ACDQ96AP0 544 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MRPL38Q96DV4 380 aaKnown RBP12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MYEOVQ96EZ4 313 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CYP2S1Q96SQ9 504 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TLE6Q9H808 572 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC28A3Q9HAS3 691 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ATP13A1Q9HD20 1204 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SMPD4Q9NXE4 827 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CFAP97Q9P2B7 532 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MYOFQ9NZM1 2061 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZNF106Q9H2Y7 1883 aaKnown RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FAM237BA0A1B0GVD1 139 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TCRBV9S1A1TA0A576 114 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SRRM3A6NNA2 597 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 J3KR12 359 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RFPL2O75678 378 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 USP1O94782 785 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 POLBP06746 335 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CNTFP26441 200 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC18A1P54219 525 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LAMB3Q13751 1172 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZNF235Q14590 738 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZNF77Q15935 545 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ADGRD1Q6QNK2 874 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RANBP10Q6VN20 620 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TMEM135Q86UB9 458 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CIR1Q86X95 450 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 AGGF1Q8N302 714 aaeCLIP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TAB3Q8N5C8 712 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NETO2Q8NC67 525 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FIBINQ8TAL6 211 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FBF1Q8TES7 1133 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ARNTL2Q8WYA1 636 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PEX13Q92968 403 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 XPO6Q96QU8 1125 aaKnown RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RANBP9Q96S59 729 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TBL1YQ9BQ87 522 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CEP41Q9BYV8 373 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SSU72Q9NP77 194 aaKnown RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 HCFC1R1Q9NWW0 138 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OBP2AQ9NY56 170 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MOCS1Q9NZB8 636 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MARK1Q9P0L2 795 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 UBA2Q9UBT2 640 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SOX13Q9UN79 622 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TTLL3Q9Y4R7 772 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CCDC195A0A1B0GUA6 201 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FAM159BA6NKW6 160 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 H0Y626 953 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TBL1XO60907 577 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PENKP01210 267 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 C1QAP02745 245 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GCAP28676 217 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SSTR1P30872 391 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ACVRL1P37023 503 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PPP2R2AP63151 447 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC20A2Q08357 652 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NSUN2Q08J23 767 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC10A7Q0GE19 358 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CDH18Q13634 790 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DMC1Q14565 340 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TEAD2Q15562 447 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LONRF1Q17RB8 773 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC5A9Q2M3M2 681 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 UBAP2Q5T6F2 1119 aaKnown RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KDELC1Q6UW63 502 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 UNC5AQ6ZN44 842 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SPRED2Q7Z698 418 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 IGDCC3Q8IVU1 814 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CFAP52Q8N1V2 620 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC44A1Q8WWI5 657 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SMG7Q92540 1137 aaKnown RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CDKL2Q92772 493 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 WBP2Q969T9 261 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FEM1CQ96JP0 617 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 C2orf49Q9BVC5 232 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KIFC1Q9BW19 673 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FSD1LQ9BXM9 530 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC2A11Q9BYW1 496 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NKX2-4Q9H2Z4 354 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms