RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 UPK3BL1B0FP48 263 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 TBC1D3LB9A6J9 549 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 UPK3BL2E5RIL1 263 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 K7ERQ8 282 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 MYO1FO00160 1098 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 EEF2KO00418 725 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 KPNA3O00505 521 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 CYP1A2P05177 515 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 TBC1D3HP0C7X1 549 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 FAM228BP0C875 321 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 MIPP30301 263 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 GRIA4P48058 902 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 HCAR3P49019 387 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 DNA2P51530 1060 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 NDST2P52849 883 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 SNRPD1P62314 119 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 RACK1P63244 317 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 ARF5P84085 180 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 RAD51Q06609 339 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 SEMA3BQ13214 749 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 HNRNPDQ14103 355 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 UAP1L1Q3KQV9 507 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 INO80DQ53TQ3 878 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 CARD16Q5EG05 197 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 PPM1JQ5JR12 505 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 TBC1D3GQ6DHY5 549 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 TBC1D3CQ6IPX1 549 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 NEK5Q6P3R8 708 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 PRPF39Q86UA1 669 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 ZSCAN30Q86W11 494 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 TBC1D3Q8IZP1 549 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 UMODL1-AS1Q8N2C9 162 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 PYROXD2Q8N2H3 581 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 MINDY1Q8N5J2 469 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 AADATQ8N5Z0 425 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 NIPA2Q8N8Q9 360 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 CTNNBL1Q8WYA6 563 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 FAM131CQ96AQ9 280 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 HEPHQ9BQS7 1158 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 SNRNP25Q9BV90 132 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 PREBQ9HCU5 417 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 DNAAF2Q9NVR5 837 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 ARHGAP20Q9P2F6 1191 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 UVRAGQ9P2Y5 699 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 NEU3Q9UQ49 428 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 TNRC6BQ9UPQ9 1833 aaKnown RBP11.78□□□□□ -0.52
CCDC12-209ENST00000604164 CEP192Q8TEP8 1941 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 DOCK4Q8N1I0 1966 aa11.78□□□□□ -0.52
CCDC12-209ENST00000604164 ARHGAP42A6NI28 874 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 H3BRJ5 948 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 TM4SF5O14894 197 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 SMAD6O43541 496 aaKnown RBP11.77□□□□□ -0.53
CCDC12-209ENST00000604164 PLRG1O43660 514 aaKnown RBP11.77□□□□□ -0.53
CCDC12-209ENST00000604164 BUB1O43683 1085 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 AKR1B10O60218 316 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 DFNA5O60443 496 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 LRCH4O75427 683 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 POP4O95707 220 aaKnown RBP11.77□□□□□ -0.53
CCDC12-209ENST00000604164 GSRP00390 522 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 H2AFZP0C0S5 128 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 CSRP1P21291 193 aaKnown RBP11.77□□□□□ -0.53
CCDC12-209ENST00000604164 GLDCP23378 1020 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 DRD3P35462 400 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 ACVRL1P37023 503 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.53
CCDC12-209ENST00000604164 ARL4AP40617 200 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 C21orf59P57076 290 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 GRIK2Q13002 908 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
CCDC12-209ENST00000604164 SERINC3Q13530 473 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
CCDC12-209ENST00000604164 SARM1Q6SZW1 724 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 DPY19L3Q6ZPD9 716 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 RFX8Q6ZV50 586 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 H2AFVQ71UI9 128 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 TRIM69Q86WT6 500 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 LZTR1Q8N653 840 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 TEKT4Q8WW24 435 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 CCDC42Q96M95 316 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 NUP85Q9BW27 656 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 OSBPL1AQ9BXW6 950 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 HDAC8Q9BY41 377 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 TRIM5Q9C035 493 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 TNKS2Q9H2K2 1166 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 TM9SF3Q9HD45 589 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 SERGEFQ9UGK8 458 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 ANAPC7Q9UJX3 599 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 DMTF1Q9Y222 760 aa11.77□□□□□ -0.53
CCDC12-209ENST00000604164 RASA4BC9J798 803 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 RASA4O43374 803 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 MAGEC1O60732 1142 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 MFAP3LO75121 409 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 IGHV4-34P06331 123 aa11.76□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF883P0CG24 379 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms