RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	KYNU	Q16719	465 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	CTC1	Q2NKJ3	1217 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	MSS51	Q4VC12	460 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	LY6G5C	Q5SRR4	150 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	LRRC8B	Q6P9F7	803 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	CAND1	Q86VP6	1230 aa	Known RBP	18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	ADGRG2	Q8IZP9	1017 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	ZNF557	Q8N988	423 aa	Predicted RBP	18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	PYROXD1	Q8WU10	500 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	OSCP1	Q8WVF1	389 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	RSPRY1	Q96DX4	576 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	C9orf72	Q96LT7	481 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	LRRC3B	Q96PB8	259 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	ZIM3	Q96PE6	472 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	SLC25A51	Q9H1U9	297 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	LRRC40	Q9H9A6	602 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	TRPV4	Q9HBA0	871 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	OBP2A	Q9NY56	170 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	UBP1	Q9NZI7	540 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	OR51B4	Q9Y5P0	310 aa		18.25	■□□□□ 0.51
MACF1-233	ENST00000602421	HEPACAM2	A8MVW5	462 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	SNAP91	O60641	907 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	BANF1	O75531	89 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	SUN1	O94901	812 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	ACSL3	O95573	720 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	MTHFR	P42898	656 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	DLX2	Q07687	328 aa	Predicted RBP	18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	CBLB	Q13191	982 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	GPS2	Q13227	327 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	MTM1	Q13496	603 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	SLC12A1	Q13621	1099 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	ADGRE1	Q14246	886 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	SPARCL1	Q14515	664 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	SLC29A2	Q14542	456 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	FASTKD3	Q14CZ7	662 aa	Known RBP	18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	KCTD11	Q693B1	232 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	LRIG3	Q6UXM1	1119 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	ANKMY2	Q8IV38	441 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	KLHDC8B	Q8IXV7	354 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	DCAF4L2	Q8NA75	395 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	SPATA22	Q8NHS9	363 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	ALG14	Q96F25	216 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	OXNAD1	Q96HP4	312 aa	Predicted RBP	18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	CINP	Q9BW66	212 aa	Predicted RBP	18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	EPB41L4B	Q9H329	900 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	THG1L	Q9NWX6	298 aa	Known RBP	18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	CLEC4E	Q9ULY5	219 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	C2orf16	Q68DN1	1984 aa		18.24	■□□□□ 0.51
MACF1-233	ENST00000602421	AVIL	O75366	819 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ZMPSTE24	O75844	475 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	TYR	P14679	529 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	GRIA1	P42261	906 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	MAX	P61244	160 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	IFFO1	Q0D2I5	559 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	CCDC38	Q502W7	563 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	NAPEPLD	Q6IQ20	393 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ZNF534	Q76KX8	674 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	MICALL1	Q8N3F8	863 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	E2F7	Q96AV8	911 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	LRRC39	Q96DD0	335 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	IMP4	Q96G21	291 aa	Known RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	POLR1E	Q9GZS1	481 aa	Known RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ZFP14	Q9HCL3	533 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	MARK1	Q9P0L2	795 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	VPS51	Q9UID3	782 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ACTL7A	Q9Y615	435 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	TRANK1	O15050	2925 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	AP3B1	O00203	1094 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	MT-CYB	P00156	380 aa	Predicted RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	NUDT17	P0C025	328 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	GBP2	P32456	591 aa	Predicted RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	CD70	P32970	193 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ELK3	P41970	407 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	MAGEA3	P43357	314 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	PLK1	P53350	603 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	EIF3B	P55884	814 aa	Known RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	GEMIN4	P57678	1058 aa	Known RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ARF5	P84085	180 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	NIPAL4	Q0D2K0	466 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	MPP3	Q13368	585 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	DHCR24	Q15392	516 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	RETSAT	Q6NUM9	610 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	LINC00523	Q86TU6	105 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	PALM2	Q8IXS6	379 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	APCDD1	Q8J025	514 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	PGBD5	Q8N414	524 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	FBXO36	Q8NEA4	188 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	UHMK1	Q8TAS1	419 aa	Known RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ACD	Q96AP0	544 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ZBTB9	Q96C00	473 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	MYADM	Q96S97	322 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	GAS2L1	Q99501	681 aa	Predicted RBP	18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	VPS37B	Q9H9H4	285 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	ABCB8	Q9NUT2	735 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	CHMP2B	Q9UQN3	213 aa		18.23	■□□□□ 0.51
MACF1-233	ENST00000602421	PMPCB	O75439	489 aa		18.22	■□□□□ 0.51
MACF1-233	ENST00000602421	NFATC1	O95644	943 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms