RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 LRRC39Q96DD0 335 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 FCRL2Q96LA5 508 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-211ENST00000600927 GDAP1L1Q96MZ0 367 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 PPP1R2P1Q96PQ5 205 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 PHOX2BQ99453 314 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 KLC2Q9H0B6 622 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 LMAN1LQ9HAT1 526 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 FBRSL1Q9HCM7 1045 aaKnown RBP11.79□□□□□ -0.52
ZNF548-211ENST00000600927 ANLNQ9NQW6 1124 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 TBC1D14Q9P2M4 693 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 SFMBT1Q9UHJ3 866 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 FBXO4Q9UKT5 387 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 TRHDEQ9UKU6 1024 aa11.79□□□□□ -0.52
ZNF548-211ENST00000600927 A0A0A0MRY4 1105 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 DRGXA6NNA5 263 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 FAM72CH0Y354 149 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 RIPK2O43353 540 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 LATS1O95835 1130 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 SP9P0CG40 484 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 RHOQP17081 205 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 TPSB2P20231 275 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 CCNCP24863 283 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
ZNF548-211ENST00000600927 OPRD1P41143 372 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 EIF2DP41214 584 aaKnown RBP11.78□□□□□ -0.52
ZNF548-211ENST00000600927 NDST2P52849 883 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 GDF10P55107 478 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 ARL4CP56559 192 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 SARNPP82979 210 aaKnown RBP11.78□□□□□ -0.52
ZNF548-211ENST00000600927 GALNT2Q10471 571 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 DHCR24Q15392 516 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 TPSAB1Q15661 275 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 PARP6Q2NL67 630 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 C10orf120Q5SQS8 335 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 FAM72AQ5TYM5 149 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 EMC10Q5UCC4 262 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 FAM72DQ6L9T8 149 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 Q6ZS52 159 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 FAM72BQ86X60 149 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 BBS7Q8IWZ6 715 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 PDIK1LQ8N165 341 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 PLD4Q96BZ4 506 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 SPATA13Q96N96 652 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 RBM15Q96T37 977 aaKnown RBP eCLIP11.78□□□□□ -0.52
ZNF548-211ENST00000600927 P2RY13Q9BPV8 354 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 CCDC77Q9BR77 488 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 MAGEB5Q9BZ81 275 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 SEMA4AQ9H3S1 761 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 EIF2B3Q9NR50 452 aaKnown RBP11.78□□□□□ -0.52
ZNF548-211ENST00000600927 ETNK2Q9NVF9 386 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 FAM86C1Q9NVL1 165 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 SPATA6Q9NWH7 488 aaPredicted RBP11.78□□□□□ -0.52
ZNF548-211ENST00000600927 PLAAQ9Y263 795 aa11.78□□□□□ -0.52
ZNF548-211ENST00000600927 FANCMQ8IYD8 2048 aa11.77□□□□□ -0.52
ZNF548-211ENST00000600927 ERI2A8K979 691 aaKnown RBP11.77□□□□□ -0.53
ZNF548-211ENST00000600927 HMGB1P1B2RPK0 211 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-211ENST00000600927 AP3B1O00203 1094 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.53
ZNF548-211ENST00000600927 PSMD3O43242 534 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 HOXC11O43248 304 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-211ENST00000600927 MFSD11O43934 449 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 STC2O76061 302 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 ZSCAN5DPP0CG00 497 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 MLNP12872 115 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 ETS1P14921 441 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 DRD1P21728 446 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 MAGEA4P43358 317 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 EFEMP1Q12805 493 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 SEMA5AQ13591 1074 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 SLC29A2Q14542 456 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 KCNJ11Q14654 390 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 STAT4Q14765 748 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 RASA2Q15283 850 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 AGBL2Q5U5Z8 902 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 AFMIDQ63HM1 303 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 ETFBKMTQ8IXQ9 262 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 ZNF683Q8IZ20 524 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 UMODL1-AS1Q8N2C9 162 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 PHTF2Q8N3S3 785 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 SPEM1Q8N4L4 309 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 ATOH1Q92858 354 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-211ENST00000600927 DDX50Q9BQ39 737 aaKnown RBP11.77□□□□□ -0.53
ZNF548-211ENST00000600927 EPB41L4BQ9H329 900 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 CDC42EP4Q9H3Q1 356 aaKnown RBP11.77□□□□□ -0.53
ZNF548-211ENST00000600927 TMBIM4Q9HC24 238 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 TMEM248Q9NWD8 314 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 MARK1Q9P0L2 795 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 FETUBQ9UGM5 382 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 NEU3Q9UQ49 428 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.53
ZNF548-211ENST00000600927 SLC12A8A0AV02 714 aa11.76□□□□□ -0.53
ZNF548-211ENST00000600927 CHURC1-FNTBB4DL54 471 aa11.76□□□□□ -0.53
ZNF548-211ENST00000600927 E9PAM4 449 aa11.76□□□□□ -0.53
ZNF548-211ENST00000600927 LAMTOR5O43504 91 aa11.76□□□□□ -0.53
ZNF548-211ENST00000600927 SPAG6O75602 509 aa11.76□□□□□ -0.53
ZNF548-211ENST00000600927 ADH1CP00326 375 aa11.76□□□□□ -0.53
ZNF548-211ENST00000600927 EGFP01133 1207 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms