RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	MFAP3L	O75121	409 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	FSBP	O95073	299 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	IGHV4-34	P06331	123 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CTSL	P07711	333 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CD27	P26842	260 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CCR5	P51681	352 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ZNF135	P52742	658 aa	Predicted RBP	13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	METAP1	P53582	386 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ADK	P55263	362 aa	Known RBP	13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TPI1	P60174	286 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	PARP15	Q460N3	678 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CARD16	Q5EG05	197 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	KIAA0895L	Q68EN5	471 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DPY19L3	Q6ZPD9	716 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CHST14	Q8NCH0	376 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ARHGEF26	Q96DR7	871 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	KCTD15	Q96SI1	283 aa	Predicted RBP	13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CHP1	Q99653	195 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	NUP85	Q9BW27	656 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TRIM5	Q9C035	493 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TNKS2	Q9H2K2	1166 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	IP6K2	Q9UHH9	426 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DCHS1	Q96JQ0	3298 aa		13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.74	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	NUP205	Q92621	2012 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DOCK4	Q8N1I0	1966 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	FAM47DP	A6NHR8	397 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	RASA4B	C9J798	803 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	MYO1F	O00160	1098 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	BCAT2	O15382	392 aa	Predicted RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	RASA4	O43374	803 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	PRNP	P04156	253 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	SYP	P08247	313 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	IL1R2	P27930	398 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	RECQL	P46063	649 aa	Predicted RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	NDST2	P52849	883 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CNTN1	Q12860	1018 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	SERINC3	Q13530	473 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ARSI	Q5FYB1	569 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DAB2IP	Q5VWQ8	1189 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	NCEH1	Q6PIU2	408 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	RFX8	Q6ZV50	586 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CNGA4	Q8IV77	575 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ZCCHC9	Q8N567	271 aa	Known RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	OR14C36	Q8NHC7	312 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CASKIN2	Q8WXE0	1202 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ORAI3	Q9BRQ5	295 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	KLC2	Q9H0B6	622 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	RBSN	Q9H1K0	784 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	KDM4C	Q9H3R0	1056 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	LRRC19	Q9H756	370 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	FSCN3	Q9NQT6	498 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CWC15	Q9P013	229 aa	Known RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	IL36A	Q9UHA7	158 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ANAPC7	Q9UJX3	599 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TPX2	Q9ULW0	747 aa	Known RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	FCF1	Q9Y324	198 aa	Known RBP	13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ACTL7A	Q9Y615	435 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	SLCO1B1	Q9Y6L6	691 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	WASF2	Q9Y6W5	498 aa		13.73	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	LAMA1	P25391	3075 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DNAH14	Q0VDD8	3507 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3D	A0A087WVF3	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3I	A0A087WXS9	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3E	A0A087X179	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3K	A0A087X1G2	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517		A0A1W2PPC4	97 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3L	B9A6J9	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	RNF103	O00237	685 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	PLK4	O00444	970 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DAPK3	O43293	454 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	BUB1	O43683	1085 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	AKR1B10	O60218	316 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	H2AFZ	P0C0S5	128 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3H	P0C7X1	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	RARA	P10276	462 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TCF4	P15884	667 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ERCC2	P18074	760 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	MAPK8	P45983	427 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DNA2	P51530	1060 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ATXN3	P54252	364 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ADPRH	P54922	357 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	FOXK2	Q01167	660 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CCDC15	Q0P6D6	951 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	INO80D	Q53TQ3	878 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	KCNT1	Q5JUK3	1230 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3G	Q6DHY5	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3C	Q6IPX1	549 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	LEKR1	Q6ZMV7	388 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	H2AFV	Q71UI9	128 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	SNX19	Q92543	992 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	HMCES	Q96FZ2	354 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	BTBD6	Q96KE9	485 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CCDC42	Q96M95	316 aa		13.72	□□□□□ -0.21

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