RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 C2orf27AQ580R0 203 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF572Q7Z3I7 529 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 METTL3Q86U44 580 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 CDKL3Q8IVW4 592 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 IL17RCQ8NAC3 791 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 ATP11CQ8NB49 1132 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 ISG20Q96AZ6 181 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 IL12RB2Q99665 862 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 AP1M1Q9BXS5 423 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 CEP44Q9C0F1 390 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 C10orf88Q9H8K7 445 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 USP29Q9HBJ7 922 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 ZDHHC4Q9NPG8 344 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 HOMER3Q9NSC5 361 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 CACNA2D2Q9NY47 1150 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 DRG1Q9Y295 367 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 STON1Q9Y6Q2 735 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 MUC22E2RYF6 1773 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 KRIT1O00522 736 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 MTSS1O43312 755 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 ADAM23O75077 832 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF189O75820 626 aaPredicted RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 CCNB1P14635 433 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 PTPN3P26045 913 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 RBL1P28749 1068 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 NTSR1P30989 418 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 NNMTP40261 264 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 RPS9P46781 194 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 RENBPP51606 427 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 AP1B1Q10567 949 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 ZBTB17Q13105 803 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 TUBB2AQ13885 445 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 GAS6Q14393 721 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 LBRQ14739 615 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 DLG2Q15700 870 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 FNDC3BQ53EP0 1204 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 MARC1Q5VT66 337 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 PKN3Q6P5Z2 889 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 DARS2Q6PI48 645 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 SERPINA13PQ6UXR4 307 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 Q6ZS52 159 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 TRMT11Q7Z4G4 463 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 PLPP6Q8IY26 295 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 PCDH20Q8N6Y1 951 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 CNTD1Q8N815 330 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 HTR3CQ8WXA8 447 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 VOPP1Q96AW1 172 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 PSKH2Q96QS6 385 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 TUBB2BQ9BVA1 445 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 CHRDQ9H2X0 955 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 DLGAP2Q9P1A6 1054 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 LHX3Q9UBR4 397 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 AMACRQ9UHK6 382 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 SIT1Q9Y3P8 196 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 MRFAP1Q9Y605 127 aa12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 NYNRINQ9P2P1 1898 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-206ENST00000600118 TECTAO75443 2155 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 WASH3PC4AMC7 463 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 SGK1O00141 431 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 MUSKO15146 869 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 GSRP00390 522 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 JCHAINP01591 159 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 ITGAVP06756 1048 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 C7P10643 843 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 HLA-EP13747 358 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 MMP13P45452 471 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 TEX44Q53QW1 395 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 HEATR6Q6AI08 1181 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 ALG1LQ6GMV1 187 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 CHPFQ8IZ52 775 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 PGBD5Q8N414 524 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 TXNDC5Q8NBS9 432 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 FLCNQ8NFG4 579 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 RPLP0P6Q8NHW5 317 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 NSMCE1Q8WV22 266 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 PTPRN2Q92932 1015 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 MAGOHBQ96A72 148 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 RTP4Q96DX8 246 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 VAT1Q99536 393 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 MGME1Q9BQP7 344 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 RBM22Q9NW64 420 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 ATP8A1Q9Y2Q0 1164 aa12.86□□□□□ -0.35
CHMP2A-206ENST00000600118 NUP205Q92621 2012 aa12.85□□□□□ -0.35
CHMP2A-206ENST00000600118 GOLGA6L10A0A0M3HER8 536 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms