RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 FCF1Q9Y324 198 aaKnown RBP23.07■■□□□ 1.28
CCDC9-204ENST00000599398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.07■■□□□ 1.283e-7■■□□□ 11.8
CCDC9-204ENST00000599398 ACTL7AQ9Y615 435 aa23.07■■□□□ 1.28
CCDC9-204ENST00000599398 GIPC1O14908 333 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 CBFA2T2O43439 604 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 PRNPP04156 253 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 CTSLP07711 333 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 ADRB1P08588 477 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 CSRP1P21291 193 aaKnown RBP23.06■■□□□ 1.28
CCDC9-204ENST00000599398 CASP14P31944 242 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 ZNF252P-AS1Q0IIN9 211 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 DEFB124Q8NES8 71 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 GRIN3AQ8TCU5 1115 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 CEP44Q9C0F1 390 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 SLC32A1Q9H598 525 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 CATSPERBQ9H7T0 1116 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 DYRK4Q9NR20 520 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 DNAAF2Q9NVR5 837 aaKnown RBP23.06■■□□□ 1.28
CCDC9-204ENST00000599398 IL36AQ9UHA7 158 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 AP4E1Q9UPM8 1137 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 PLXNA2O75051 1894 aa23.06■■□□□ 1.28
CCDC9-204ENST00000599398 PCNX2A6NKB5 2137 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 A0A1W2PPC4 97 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 SLC7A4O43246 635 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 CCR5P51681 352 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 GEMIN4P57678 1058 aaKnown RBP23.05■■□□□ 1.28
CCDC9-204ENST00000599398 TPI1P60174 286 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 SEMA3BQ13214 749 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 N4BP2L1Q5TBK1 243 aaPredicted RBP23.05■■□□□ 1.28
CCDC9-204ENST00000599398 AGBL4Q5VU57 503 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 IL27RAQ6UWB1 636 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 LAYNQ6UX15 382 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 LEKR1Q6ZMV7 388 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 DPY19L3Q6ZPD9 716 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 PCDH20Q8N6Y1 951 aaKnown RBP23.05■■□□□ 1.28
CCDC9-204ENST00000599398 RNF214Q8ND24 703 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 TMIEQ8NEW7 156 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 FNIP1Q8TF40 1166 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 DHX35Q9H5Z1 703 aaKnown RBP23.05■■□□□ 1.28
CCDC9-204ENST00000599398 GAREM1Q9H706 876 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 OSGEPQ9NPF4 335 aa23.05■■□□□ 1.28
CCDC9-204ENST00000599398 PLRG1O43660 514 aaKnown RBP23.04■■□□□ 1.28
CCDC9-204ENST00000599398 PRPSAP2O60256 369 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 CER1O95813 267 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 CEACAM1P13688 526 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 GRIA4P48058 902 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 BNC1Q01954 994 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 ARSIQ5FYB1 569 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 ERMARDQ5T6L9 678 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 RYBPQ8N488 228 aaPredicted RBP23.04■■□□□ 1.28
CCDC9-204ENST00000599398 ARFGAP1Q8N6T3 406 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 FAM131CQ96AQ9 280 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 SLC6A18Q96N87 628 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 ORAI3Q9BRQ5 295 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 SNRNP25Q9BV90 132 aaKnown RBP23.04■■□□□ 1.28
CCDC9-204ENST00000599398 TM6SF2Q9BZW4 377 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 KDM4CQ9H3R0 1056 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 AASDHPPTQ9NRN7 309 aa23.04■■□□□ 1.28
CCDC9-204ENST00000599398 CABIN1Q9Y6J0 2220 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 FGF10O15520 208 aaPredicted RBP23.03■■□□□ 1.28
CCDC9-204ENST00000599398 BUB1O43683 1085 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 ZNF821O75541 412 aaPredicted RBP23.03■■□□□ 1.28
CCDC9-204ENST00000599398 LEFTY1O75610 366 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 CD160O95971 181 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 MIPP30301 263 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 PPP2CBP62714 309 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 RACK1P63244 317 aaKnown RBP23.03■■□□□ 1.28
CCDC9-204ENST00000599398 PPP2CAP67775 309 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 CCDC15Q0P6D6 951 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 KIF19Q2TAC6 998 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 HLA-BQ31612 363 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 CARD16Q5EG05 197 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 ARRDC3Q96B67 414 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 PEBP4Q96S96 227 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 HEPHQ9BQS7 1158 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 EBF2Q9HAK2 575 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 IL21RQ9HBE5 538 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 TPX2Q9ULW0 747 aaKnown RBP23.03■■□□□ 1.28
CCDC9-204ENST00000599398 ANKRD6Q9Y2G4 727 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 DOCK9Q9BZ29 2069 aa23.03■■□□□ 1.28
CCDC9-204ENST00000599398 TMEM131Q92545 1883 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 A0A087X0T9 212 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 CXorf51AA0A1B0GTR3 108 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 EEF2KO00418 725 aaKnown RBP23.02■■□□□ 1.28
CCDC9-204ENST00000599398 KDELR3O43731 214 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 GJB3O75712 270 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 FAM228BP0C875 321 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 MAT2AP31153 395 aaKnown RBP23.02■■□□□ 1.28
CCDC9-204ENST00000599398 HTR7P34969 479 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 CCNHP51946 323 aaPredicted RBP23.02■■□□□ 1.28
CCDC9-204ENST00000599398 C21orf59P57076 290 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 SLC14A1Q13336 389 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 CA9Q16790 459 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 ISG20Q96AZ6 181 aaKnown RBP23.02■■□□□ 1.28
CCDC9-204ENST00000599398 PPP1R16AQ96I34 528 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 SERAC1Q96JX3 654 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 THAP2Q9H0W7 228 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 NOL6Q9H6R4 1146 aaKnown RBP23.02■■□□□ 1.28
CCDC9-204ENST00000599398 ZDHHC6Q9H6R6 413 aa23.02■■□□□ 1.28
CCDC9-204ENST00000599398 HECAQ9UBI9 543 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms