RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 CLEC4EQ9ULY5 219 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 NFU1Q9UMS0 254 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 TTLL3Q9Y4R7 772 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 PRUNE2Q8WUY3 3088 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 DOCK8Q8NF50 2099 aa15.74■□□□□ 0.11
UPF1-206ENST00000598471 NYNRINQ9P2P1 1898 aaKnown RBP15.74■□□□□ 0.11
UPF1-206ENST00000598471 KIF26AQ9ULI4 1882 aaPredicted RBP15.74■□□□□ 0.11
UPF1-206ENST00000598471 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 C2CD4DB7Z1M9 353 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 ZBTB24O43167 697 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 PSMD3O43242 534 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 PEX11BO96011 259 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 BMP1P13497 986 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 NFKB1P19838 968 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 PSMB4P28070 264 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 HLA-FP30511 346 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 TNK2Q07912 1038 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 SLC20A2Q08357 652 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 SLC10A7Q0GE19 358 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 SEMA5AQ13591 1074 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 KCTD19Q17RG1 926 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 PREPLQ4J6C6 727 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 RNASEH2BQ5TBB1 312 aaKnown RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 HIBCHQ6NVY1 386 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 TAB3Q8N5C8 712 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 NAT16Q8N8M0 369 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 ST13P5Q8NFI4 369 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 CPT1BQ92523 772 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 ALG14Q96F25 216 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 FMO2Q99518 471 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 FRMD8Q9BZ67 464 aaPredicted RBP15.73■□□□□ 0.11
UPF1-206ENST00000598471 BRD9Q9H8M2 597 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 ETNK1Q9HBU6 452 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 GLOD4Q9HC38 313 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 NT5MQ9NPB1 228 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 HPS4Q9NQG7 708 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 VPS51Q9UID3 782 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 SLC25A13Q9UJS0 675 aa15.73■□□□□ 0.11
UPF1-206ENST00000598471 SPTBN5Q9NRC6 3674 aaKnown RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 NUP205Q92621 2012 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 ERI2A8K979 691 aaKnown RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 SNAP91O60641 907 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 ZMPSTE24O75844 475 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 ANXA9O76027 345 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 METTL18O95568 372 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 HLA-DQB2P05538 268 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 APRTP07741 180 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 TPSB2P20231 275 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 GLDCP23378 1020 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 SARNPP82979 210 aaKnown RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 ARF5P84085 180 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 CDK16Q00536 496 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 ITKQ08881 620 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 TRADDQ15628 312 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 TPSAB1Q15661 275 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 SMAD2Q15796 467 aaKnown RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 ITPRIPL2Q3MIP1 535 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 INO80DQ53TQ3 878 aaPredicted RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 FAXCQ5TGI0 409 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 GRAMD4Q6IC98 578 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 EMBQ6PCB8 327 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 ZDHHC24Q6UX98 284 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 APCDD1Q8J025 514 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 CNTD1Q8N815 330 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 FBXO25Q8TCJ0 367 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 CSGALNACT1Q8TDX6 532 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 LMLNQ96KR4 655 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 FCRL5Q96RD9 977 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 POLR1EQ9GZS1 481 aaKnown RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 SLC25A51Q9H1U9 297 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 EIF2B3Q9NR50 452 aaKnown RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 ZDHHC18Q9NUE0 388 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 FBXO10Q9UK96 956 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 SLC27A6Q9Y2P4 619 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 ATP8A1Q9Y2Q0 1164 aa15.72■□□□□ 0.11
UPF1-206ENST00000598471 AAR2Q9Y312 384 aaKnown RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 FARP1Q9Y4F1 1045 aaPredicted RBP15.72■□□□□ 0.11
UPF1-206ENST00000598471 CHD5Q8TDI0 1954 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 TULP3O75386 442 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 ASLP04424 464 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 IL9P15248 144 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 POLR2EP19388 210 aaKnown RBP15.71■□□□□ 0.11
UPF1-206ENST00000598471 CD68P34810 354 aaPredicted RBP15.71■□□□□ 0.11
UPF1-206ENST00000598471 EIF2DP41214 584 aaKnown RBP15.71■□□□□ 0.11
UPF1-206ENST00000598471 MAGEA6P43360 314 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 GEMP55040 296 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 KCNJ11Q14654 390 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 FUT11Q495W5 492 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 PTCRAQ6ISU1 281 aaPredicted RBP15.71■□□□□ 0.11
UPF1-206ENST00000598471 KIAA0907Q7Z7F0 614 aaPredicted RBP15.71■□□□□ 0.11
UPF1-206ENST00000598471 ETFBKMTQ8IXQ9 262 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 NAT8LQ8N9F0 302 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 PRCCQ92733 491 aaPredicted RBP15.71■□□□□ 0.11
UPF1-206ENST00000598471 PSKH2Q96QS6 385 aa15.71■□□□□ 0.11
UPF1-206ENST00000598471 INTS6Q9UL03 887 aaKnown RBP15.71■□□□□ 0.11
UPF1-206ENST00000598471 SHROOM3Q8TF72 1996 aa15.71■□□□□ 0.1
UPF1-206ENST00000598471 TMCC1O94876 653 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 ATP5BP06576 529 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms