RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NEU3Q9UQ49 428 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 PCDHB9Q9Y5E1 797 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 TMEM131Q92545 1883 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 TCRBV5S1A1TA0A578 114 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 ILVBLA1L0T0 632 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 SIGLEC16A6NMB1 481 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 C1QTNF3-AMACRE9PGA6 284 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 KPNA3O00505 521 aaPredicted RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 CCP110O43303 1012 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 CBFA2T3O75081 653 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF821O75541 412 aaPredicted RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 ZMPSTE24O75844 475 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 LRIG2O94898 1065 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 PLEKP08567 350 aaPredicted RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 FERP16591 822 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 CHRNA3P32297 505 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 CCR5P51681 352 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF75DP51815 510 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 C21orf59P57076 290 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 RPL7AP62424 266 aaKnown RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 RACK1P63244 317 aaKnown RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 GNA12Q03113 381 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 ARL13BQ3SXY8 428 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 FAM46CQ5VWP2 391 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 E4F1Q66K89 784 aaPredicted RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 SCYL2Q6P3W7 929 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 C22orf39Q6P5X5 142 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 STRADAQ7RTN6 431 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 CHCHD4Q8N4Q1 142 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 KLK6Q92876 244 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 ARRDC3Q96B67 414 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 MRFAP1L1Q96HT8 127 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 SERAC1Q96JX3 654 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 ACE2Q9BYF1 805 aaPredicted RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 PPARGC1AQ9UBK2 798 aaKnown RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 CA5BQ9Y2D0 317 aa14.06□□□□□ -0.16
SCAF1-203ENST00000598359 FCF1Q9Y324 198 aaKnown RBP14.06□□□□□ -0.16
SCAF1-203ENST00000598359 PCNX2A6NKB5 2137 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 A0A1W2PR77 199 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 SRRM3A6NNA2 597 aaPredicted RBP14.05□□□□□ -0.16
SCAF1-203ENST00000598359 SMTNL1A8MU46 457 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 VILLO15195 856 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ALOX15BO15296 676 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
SCAF1-203ENST00000598359 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
SCAF1-203ENST00000598359 FTH1P19P0C7X4 201 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF883P0CG24 379 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 CD38P28907 300 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 DNA2P51530 1060 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 GSCP56915 257 aaPredicted RBP14.05□□□□□ -0.16
SCAF1-203ENST00000598359 TAS2R38P59533 333 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ARF5P84085 180 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 OGDHQ02218 1023 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ARSIQ5FYB1 569 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 PPP1R15BQ5SWA1 713 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ACBD5Q5T8D3 534 aaPredicted RBP14.05□□□□□ -0.16
SCAF1-203ENST00000598359 PIP5KL1Q5T9C9 394 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ACAD10Q6JQN1 1059 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 DPY19L3Q6ZPD9 716 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 NLRP14Q86W24 1093 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 MCOLN2Q8IZK6 566 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 RHBDD1Q8TEB9 315 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 FAM131CQ96AQ9 280 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 MYOCQ99972 504 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 SYT11Q9BT88 431 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 OSBPL2Q9H1P3 480 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 TMEM51Q9NW97 253 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ARHGAP20Q9P2F6 1191 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 KNL1Q8NG31 2342 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 ADAMTS20P59510 1910 aa14.05□□□□□ -0.16
SCAF1-203ENST00000598359 DOCK4Q8N1I0 1966 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 GOLGA8CPA6NN73 597 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 LATO43561 262 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF500O60304 480 aaPredicted RBP14.04□□□□□ -0.16
SCAF1-203ENST00000598359 CD160O95971 181 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 RHOQP17081 205 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 TNFAIP3P21580 790 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 GKP32189 559 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 SERPINH1P50454 418 aaKnown RBP14.04□□□□□ -0.16
SCAF1-203ENST00000598359 NRG1Q02297 640 aaPredicted RBP14.04□□□□□ -0.16
SCAF1-203ENST00000598359 ASIC2Q16515 512 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF423Q2M1K9 1284 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF783Q6ZMS7 281 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 SLCO6A1Q86UG4 719 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 NETO2Q8NC67 525 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 OR6K2Q8NGY2 324 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D31Q96DN5 1066 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 CCDC114Q96M63 670 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 TM6SF2Q9BZW4 377 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 IL36AQ9UHA7 158 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 LHX6Q9UPM6 363 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
SCAF1-203ENST00000598359 WASF2Q9Y6W5 498 aa14.04□□□□□ -0.16
SCAF1-203ENST00000598359 LOC400499M0QZD8 3231 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 TMEM8BA6NDV4 472 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 GOLGA6L6A8MZA4 724 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms