RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
LIG1-210ENST00000596332 JRKLQ9Y4A0 524 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 WASF2Q9Y6W5 498 aa10.77□□□□□ -0.69
LIG1-210ENST00000596332 TTC24A2A3L6 582 aaPredicted RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 APOC4-APOC2K7ER74 178 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 APOL1O14791 398 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 MCF2LO15068 1137 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 MATN3O15232 486 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 INSIG1O15503 277 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 ATG13O75143 517 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 TMCC1O94876 653 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 APOC2P02655 101 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 EPHX1P07099 455 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 SP9P0CG40 484 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 NDUFV2P19404 249 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 TGM2P21980 687 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 CCNCP24863 283 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 GKP32189 559 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 CXCR5P32302 372 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 ETFBP38117 255 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 DNA2P51530 1060 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 CLCN6P51797 869 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 NRLP54845 237 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 RPS14P62263 151 aaKnown RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 PPIDQ08752 370 aaKnown RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 WASHC5Q12768 1159 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 ZBTB17Q13105 803 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 PRKD1Q15139 912 aaPredicted RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 NOMO1Q15155 1222 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 FNDC3BQ53EP0 1204 aaKnown RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 EOGTQ5NDL2 527 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 PAPD7Q5XG87 772 aaKnown RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 RETSATQ6NUM9 610 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 C22orf39Q6P5X5 142 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 SERPINA13PQ6UXR4 307 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 DPY19L3Q6ZPD9 716 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 NYAP1Q6ZVC0 841 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 Q6ZVU0 165 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 SLC13A5Q86YT5 568 aaPredicted RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 LRRC49Q8IUZ0 686 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 CCDC117Q8IWD4 279 aaPredicted RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 STK40Q8N2I9 435 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 CAMKK1Q8N5S9 505 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 UBL4BQ8N7F7 174 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 ATP11CQ8NB49 1132 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 TSEN2Q8NCE0 465 aaKnown RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 MDGA1Q8NFP4 955 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 CCDC26Q8TAB7 109 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 SLC35B2Q8TB61 432 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 ACTL9Q8TC94 416 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 COG1Q8WTW3 980 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 FAM131CQ96AQ9 280 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 HDAC11Q96DB2 347 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 ZNF599Q96NL3 588 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 HHIPQ96QV1 700 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 IL12RB2Q99665 862 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 FAM118BQ9BPY3 351 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 CEP44Q9C0F1 390 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 RSPH9Q9H1X1 276 aaPredicted RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 USP29Q9HBJ7 922 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 SPATA6Q9NWH7 488 aaPredicted RBP10.76□□□□□ -0.69
LIG1-210ENST00000596332 DONSONQ9NYP3 566 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 SUN2Q9UH99 717 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 PPM1HQ9ULR3 514 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 ZKSCAN5Q9Y2L8 839 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 HEY1Q9Y5J3 304 aa10.76□□□□□ -0.69
LIG1-210ENST00000596332 DMDP11532 3685 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 EDDM13A0A1B0GTR0 161 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 ZSCAN5CA6NGD5 496 aaPredicted RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 KCNK3O14649 394 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 ZFXP17010 805 aaPredicted RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 SERPINB6P35237 376 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 DRD3P35462 400 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 NR2C2P49116 596 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 CCR3P51677 355 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 DGKEP52429 567 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 NUBP1P53384 320 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 OTUD4Q01804 1114 aaKnown RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 TFDP2Q14188 446 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 LBRQ14739 615 aaKnown RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 ANGPT1Q15389 498 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 CARD16Q5EG05 197 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 ZFYVE27Q5T4F4 411 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 ATXN7L2Q5T6C5 722 aaPredicted RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 ALG1LQ6GMV1 187 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 TRMT11Q7Z4G4 463 aaKnown RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 METTL3Q86U44 580 aaKnown RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 CCDC50Q8IVM0 306 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 ZBTB44Q8NCP5 570 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 OR2T3Q8NH03 318 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 ARRDC2Q8TBH0 407 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 HAUS1Q96CS2 278 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 MS4A14Q96JA4 679 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 ALS2CR12Q96Q35 445 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 PSKH2Q96QS6 385 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 GORASP1Q9BQQ3 440 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 SMARCAL1Q9NZC9 954 aa10.75□□□□□ -0.69
LIG1-210ENST00000596332 UBA2Q9UBT2 640 aaPredicted RBP10.75□□□□□ -0.69
LIG1-210ENST00000596332 SERGEFQ9UGK8 458 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms