RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 RWDD4Q6NW29 188 aaKnown RBP17.4■□□□□ 0.38
CCDC9-202ENST00000595659 FAM72BQ86X60 149 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 ZNF677Q86XU0 584 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 TMIEQ8NEW7 156 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 NDFIP2Q9NV92 336 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 OR12D3Q9UGF7 316 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 IL36AQ9UHA7 158 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 LHX6Q9UPM6 363 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 SIK3Q9Y2K2 1263 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 RAXQ9Y2V3 346 aa17.4■□□□□ 0.38
CCDC9-202ENST00000595659 FCF1Q9Y324 198 aaKnown RBP17.4■□□□□ 0.38
CCDC9-202ENST00000595659 PRNPP04156 253 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 SDC4P31431 198 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 GKP32189 559 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 ADRA1BP35368 520 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 ANP32AP39687 249 aaKnown RBP17.39■□□□□ 0.37
CCDC9-202ENST00000595659 STAT1P42224 750 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 RXRGP48443 463 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 CLCN6P51797 869 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 CLDN2P57739 230 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 ARF5P84085 180 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 CYP4F3Q08477 520 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 SMAD1Q15797 465 aaKnown RBP17.39■□□□□ 0.37
CCDC9-202ENST00000595659 ZNF284Q2VY69 593 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 SEL1L3Q68CR1 1132 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 RETSATQ6NUM9 610 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 LEKR1Q6ZMV7 388 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 CLEC17AQ6ZS10 378 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 ERN2Q76MJ5 926 aaKnown RBP17.39■□□□□ 0.37
CCDC9-202ENST00000595659 GALNT15Q8N3T1 639 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 KLHDC7BQ96G42 594 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 ERVMER34-1Q9H9K5 563 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 DNAI1Q9UI46 699 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 ZFR2Q9UPR6 939 aaKnown RBP17.39■□□□□ 0.37
CCDC9-202ENST00000595659 WASF2Q9Y6W5 498 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 FREM2Q5SZK8 3169 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 PLXNA2O75051 1894 aa17.39■□□□□ 0.37
CCDC9-202ENST00000595659 DMXL2Q8TDJ6 3036 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 C2CD4BA6NLJ0 364 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 YKT6O15498 198 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 NUDT1P36639 197 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 SERPINH1P50454 418 aaKnown RBP17.38■□□□□ 0.37
CCDC9-202ENST00000595659 PTP4A2Q12974 167 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 CARD16Q5EG05 197 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 ACBD5Q5T8D3 534 aaPredicted RBP17.38■□□□□ 0.37
CCDC9-202ENST00000595659 SASS6Q6UVJ0 657 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 ZNF783Q6ZMS7 281 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 ARCQ7LC44 396 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 HORMAD1Q86X24 394 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 RYBPQ8N488 228 aaPredicted RBP17.38■□□□□ 0.37
CCDC9-202ENST00000595659 OXR1Q8N573 874 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 CCDC185Q8N715 623 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 OR6K2Q8NGY2 324 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 TM6SF2Q9BZW4 377 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 SEPT11Q9NVA2 429 aaKnown RBP17.38■□□□□ 0.37
CCDC9-202ENST00000595659 ADAM22Q9P0K1 906 aa17.38■□□□□ 0.37
CCDC9-202ENST00000595659 PPARGC1AQ9UBK2 798 aaKnown RBP17.38■□□□□ 0.37
CCDC9-202ENST00000595659 KNL1Q8NG31 2342 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 MAGEC1O60732 1142 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 RFPL3O75679 317 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 CD160O95971 181 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 THEGLP0DJG4 465 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 KRT3P12035 628 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 UNGP13051 313 aaPredicted RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 HOXB3P14651 431 aaPredicted RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 RFC1P35251 1148 aaPredicted RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 ACADVLP49748 655 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 CCNHP51946 323 aaPredicted RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 UBXN1Q04323 297 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 CCDC15Q0P6D6 951 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 CAMK2BQ13554 666 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 ARL13BQ3SXY8 428 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 SFMBT2Q5VUG0 894 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 RBM43Q6ZSC3 357 aaKnown RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 KANSL1Q7Z3B3 1105 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 IQCHQ86VS3 1027 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 TMEM145Q8NBT3 493 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 NETO2Q8NC67 525 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 NEK11Q8NG66 645 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 FAM172AQ8WUF8 416 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 HNRNPLLQ8WVV9 542 aaKnown RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 HEPHQ9BQS7 1158 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 CALN1Q9BXU9 219 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 HDAC8Q9BY41 377 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 ZDHHC6Q9H6R6 413 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 TMEM51Q9NW97 253 aa17.37■□□□□ 0.37
CCDC9-202ENST00000595659 HECAQ9UBI9 543 aaPredicted RBP17.37■□□□□ 0.37
CCDC9-202ENST00000595659 CHD6Q8TD26 2715 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 TMEM131Q92545 1883 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 TRIM38O00635 465 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 LRIG2O94898 1065 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 PLEKP08567 350 aaPredicted RBP17.36■□□□□ 0.37
CCDC9-202ENST00000595659 JUPP14923 745 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 RHOQP17081 205 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 CDK11BP21127 795 aaKnown RBP17.36■□□□□ 0.37
CCDC9-202ENST00000595659 AKT2P31751 481 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 NSFP46459 744 aaKnown RBP17.36■□□□□ 0.37
CCDC9-202ENST00000595659 HDAC4P56524 1084 aa17.36■□□□□ 0.37
CCDC9-202ENST00000595659 SLC20A2Q08357 652 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms