RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 BIRC7Q96CA5 298 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 CCDC114Q96M63 670 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 EPAS1Q99814 870 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 ISCUQ9H1K1 167 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 NEUROG2Q9H2A3 272 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 DNAI1Q9UI46 699 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 SARDHQ9UL12 918 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 FZD10Q9ULW2 581 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 LUC7L2Q9Y383 392 aaKnown RBP15.44■□□□□ 0.06
TRIM28-205ENST00000595028 SLCO1B1Q9Y6L6 691 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 TMEM191CA6NGB0 347 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 LRRC72A6NJI9 287 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 C10orf142B7Z368 130 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 BNIP3LO60238 219 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 RAMP2O60895 175 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 FSBPO95073 299 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 SERPING1P05155 500 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 IGHV4-34P06331 123 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 ACVRL1P37023 503 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 METAP1P53582 386 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 GALCP54803 685 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 UAP1L1Q3KQV9 507 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 FAM46CQ5VWP2 391 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 NCEH1Q6PIU2 408 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 MINDY1Q8N5J2 469 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 RTL3Q8N8U3 475 aaKnown RBP15.43■□□□□ 0.06
TRIM28-205ENST00000595028 OR2A12Q8NGT7 310 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 OR2T34Q8NGX1 318 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 PIP4K2CQ8TBX8 421 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 CPLX3Q8WVH0 158 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 ARHGEF2Q92974 986 aaKnown RBP15.43■□□□□ 0.06
TRIM28-205ENST00000595028 ORAI3Q9BRQ5 295 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 ACE2Q9BYF1 805 aaPredicted RBP15.43■□□□□ 0.06
TRIM28-205ENST00000595028 TRIM7Q9C029 511 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 CEP44Q9C0F1 390 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 OSGEPQ9NPF4 335 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 PPM1HQ9ULR3 514 aa15.43■□□□□ 0.06
TRIM28-205ENST00000595028 TMEM131Q92545 1883 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 CXorf51AA0A1B0GTR3 108 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 FAM47DPA6NHR8 397 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 SLC7A4O43246 635 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 CBFA2T2O43439 604 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 CREB3O43889 395 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 CTSLP07711 333 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 CD27P26842 260 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 EPHB2P29323 1055 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 CASP14P31944 242 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 SLC20A2Q08357 652 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 AGBL4Q5VU57 503 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 ARFGAP1Q8N6T3 406 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 OR2I1PQ8NGU4 316 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 PEBP4Q96S96 227 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRIM28-205ENST00000595028 ZDHHC5Q9C0B5 715 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 MAGEH1Q9H213 219 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 TNKS2Q9H2K2 1166 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 AP4E1Q9UPM8 1137 aa15.42■□□□□ 0.06
TRIM28-205ENST00000595028 FARP1Q9Y4F1 1045 aaPredicted RBP15.42■□□□□ 0.06
TRIM28-205ENST00000595028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.42■□□□□ 0.061e-11■□□□□ 8.5
TRIM28-205ENST00000595028 CABIN1Q9Y6J0 2220 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 EIF3CLB5ME19 914 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 PLK4O00444 970 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 FGF10O15520 208 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 PLRG1O43660 514 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 OPHN1O60890 802 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 ZNF821O75541 412 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 ZIC2O95409 532 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 CD160O95971 181 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 CHRNA3P32297 505 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 HTR7P34969 479 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 RECQLP46063 649 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 GRIA4P48058 902 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 CCR5P51681 352 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 AFF3P51826 1226 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 GEMIN4P57678 1058 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 TPI1P60174 286 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 BNC1Q01954 994 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 CNTN1Q12860 1018 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 POLD3Q15054 466 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 NFKBIBQ15653 356 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 POM121L1PQ3SYA9 428 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 PCDH20Q8N6Y1 951 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 CHST14Q8NCH0 376 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 RNF214Q8ND24 703 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 OR14C36Q8NHC7 312 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 EIF3CQ99613 913 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 SNRNP25Q9BV90 132 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 NOL6Q9H6R4 1146 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 CATSPERBQ9H7T0 1116 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 MRPL47Q9HD33 250 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 TM9SF3Q9HD45 589 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 DNAAF2Q9NVR5 837 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 GPATCH2LQ9NWQ4 482 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 MYO1AQ9UBC5 1043 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 TPX2Q9ULW0 747 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 FCF1Q9Y324 198 aaKnown RBP15.41■□□□□ 0.06
TRIM28-205ENST00000595028 ADAMTS20P59510 1910 aa15.41■□□□□ 0.06
TRIM28-205ENST00000595028 PCNX2A6NKB5 2137 aa15.4■□□□□ 0.06
TRIM28-205ENST00000595028 A0A087X0T9 212 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms