RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 ARHGAP6O43182 974 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 ATMINO43313 823 aaPredicted RBP18.41■□□□□ 0.54
VAT1-208ENST00000590924 PCDHGA12O60330 932 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 DKK1O94907 266 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 GJB6O95452 261 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 ADH1BP00325 375 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 CAPNS1P04632 268 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 SLC8A1P32418 973 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 CTSKP43235 329 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 CCT8P50990 548 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 PLK1P53350 603 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 OXCT1P55809 520 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 SULT2A1Q06520 285 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 ELAVL3Q14576 367 aaKnown RBP18.41■□□□□ 0.54
VAT1-208ENST00000590924 RABGAP1LQ5R372 815 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 OTUD1Q5VV17 481 aaPredicted RBP18.41■□□□□ 0.54
VAT1-208ENST00000590924 NCEH1Q6PIU2 408 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 ADAT2Q7Z6V5 191 aaKnown RBP18.41■□□□□ 0.54
VAT1-208ENST00000590924 RHOT2Q8IXI1 618 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 TXLNBQ8N3L3 684 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 OR2T34Q8NGX1 318 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 RHBDD1Q8TEB9 315 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 RPL10LQ96L21 214 aaKnown RBP18.41■□□□□ 0.54
VAT1-208ENST00000590924 OMDQ99983 421 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 NUP85Q9BW27 656 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 PACSIN1Q9BY11 444 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 NEUROG2Q9H2A3 272 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 WDCPQ9H6R7 721 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 TOR4AQ9NXH8 423 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 BTBD3Q9Y2F9 522 aa18.41■□□□□ 0.54
VAT1-208ENST00000590924 TDRD6O60522 2096 aaKnown RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 VILLO15195 856 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 DFNA5O60443 496 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 RNASEH2AO75792 299 aaKnown RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 MTA2O94776 668 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 C5AR1P21730 350 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 MZF1P28698 734 aaPredicted RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 NNMTP40261 264 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 GRK6P43250 576 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 PSMD8P48556 350 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 STK19P49842 368 aaPredicted RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 VASPP50552 380 aaPredicted RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 NME3Q13232 169 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 PIGHQ14442 188 aaPredicted RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 CXorf57Q6NSI4 855 aaKnown RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 CIR1Q86X95 450 aaPredicted RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 STK40Q8N2I9 435 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 AADATQ8N5Z0 425 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 RNF34Q969K3 372 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 ARHGEF26Q96DR7 871 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 CALR3Q96L12 384 aaKnown RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 ACE2Q9BYF1 805 aaPredicted RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 PIGVQ9NUD9 493 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 ARHGEF38Q9NXL2 777 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 CTTNBP2NLQ9P2B4 639 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 TPX2Q9ULW0 747 aaKnown RBP18.4■□□□□ 0.54
VAT1-208ENST00000590924 APC2O95996 2303 aa18.4■□□□□ 0.54
VAT1-208ENST00000590924 H0Y8X5 98 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 MYO1FO00160 1098 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 GOT1P17174 413 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 TFE3P19532 575 aaPredicted RBP18.39■□□□□ 0.53
VAT1-208ENST00000590924 CCR5P51681 352 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 ADPRHP54922 357 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 ATP11AP98196 1134 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 C15orf59Q2T9L4 293 aaPredicted RBP18.39■□□□□ 0.53
VAT1-208ENST00000590924 KCNT1Q5JUK3 1230 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 FBXL22Q6P050 247 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 CCNI2Q6ZMN8 369 aaPredicted RBP18.39■□□□□ 0.53
VAT1-208ENST00000590924 NIPA2Q8N8Q9 360 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 FAM172AQ8WUF8 416 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 RFFLQ8WZ73 363 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 SLC6A18Q96N87 628 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 PPP1R9BQ96SB3 815 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 IP6K2Q9UHH9 426 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 CACNA1GO43497 2377 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 TRPM6Q9BX84 2022 aa18.39■□□□□ 0.53
VAT1-208ENST00000590924 SYNJ2BP-COX16A0A087WUM0 186 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 A0A0A6YYK5 440 aaPredicted RBP18.38■□□□□ 0.53
VAT1-208ENST00000590924 CCP110O43303 1012 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 RNF8O76064 485 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 ATXN1LP0C7T5 689 aaKnown RBP18.38■□□□□ 0.53
VAT1-208ENST00000590924 PSMA2P25787 234 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 ARHGAP25P42331 645 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 AIF1P55008 147 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 HADHBP55084 474 aaKnown RBP18.38■□□□□ 0.53
VAT1-208ENST00000590924 HDAC4P56524 1084 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 C21orf59P57076 290 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 OGDHQ02218 1023 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 AUHQ13825 339 aaKnown RBP18.38■□□□□ 0.53
VAT1-208ENST00000590924 ARL13BQ3SXY8 428 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 PROSER1Q86XN7 944 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 SLC35G2Q8TBE7 412 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 ZNF564Q8TBZ8 553 aaPredicted RBP18.38■□□□□ 0.53
VAT1-208ENST00000590924 FRS2Q8WU20 508 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 FAM131CQ96AQ9 280 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 SKA1Q96BD8 255 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 ALG14Q96F25 216 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 C1orf74Q96LT6 269 aa18.38■□□□□ 0.53
VAT1-208ENST00000590924 RPRD1AQ96P16 312 aaPredicted RBP18.38■□□□□ 0.53
VAT1-208ENST00000590924 HAPLN3Q96S86 360 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms